| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814083
Identifier: 237814083
GI number: 237814083
Start: 3716114
End: 3716533
Strand: Direct
Name: 237814083
Synonym: GBP346_A3869
Alternate gene names: NA
Gene position: 3716114-3716533 (Clockwise)
Preceding gene: 237814052
Following gene: 237814084
Centisome position: 90.67
GC content: 70.0
Gene sequence:
>420_bases ATGCGCGCAGCTCGCCCAAACGACGGCGGCGGGCATGGCCCGGCGGGATCGGAAACTTCCCGCGCCGGTATTACCCGGAT CGGGTGCGAAGGGTCTCTCTCAGCCTCGTCGCGCATCCGGCCGTGCCGACTCGGCAGGCCGGGGACGCGCGAAGCACCCC TGTTTCGTCGGCGGTCATTAGACCATAAAAGCGGAAACGGCCGCAAACCTCGCGCTGCGGCAAATTCGCCCGGCGCGCGG CGGCGCTGGCACAATGCCGCTGGGAATCGGCGCGCGGGCGGCATCGTCGCCGCGCGCACGAGCCCGCGCCGTTCCCGCAT TAAGCGCCGTTTAAGGCATGCTCGCCAGAATCCGCGGCATTCATGCCGCGCGCGGCGCCGCCCGCCTCACGTCGCCGGCC TCACATCAGGAAGCTCATGA
Upstream 100 bases:
>100_bases AAAAGAACTGAAGATTGCACGGTCATCGATACCTTCCGTCACGCGCGAAGTTGCGCACCCAAAAGGACGAAACCGGCGAC TGAGGCCGGCCGGGGCCGTG
Downstream 100 bases:
>100_bases CTCAATCGATGCAAGCCTCAGCCCCCGCCCCGGACGACCCGACGCAACCCCAGCCCTCGGTATCCACGTGGAGCCTCATC AAGCCCTATTGGGTCTCCGA
Product: ABC transporter, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRAARPNDGGGHGPAGSETSRAGITRIGCEGSLSASSRIRPCRLGRPGTREAPLFRRRSLDHKSGNGRKPRAAANSPGAR RRWHNAAGNRRAGGIVAARTSPRRSRIKRRLRHARQNPRHSCRARRRPPHVAGLTSGSS
Sequences:
>Translated_139_residues MRAARPNDGGGHGPAGSETSRAGITRIGCEGSLSASSRIRPCRLGRPGTREAPLFRRRSLDHKSGNGRKPRAAANSPGAR RRWHNAAGNRRAGGIVAARTSPRRSRIKRRLRHARQNPRHSCRARRRPPHVAGLTSGSS >Mature_139_residues MRAARPNDGGGHGPAGSETSRAGITRIGCEGSLSASSRIRPCRLGRPGTREAPLFRRRSLDHKSGNGRKPRAAANSPGAR RRWHNAAGNRRAGGIVAARTSPRRSRIKRRLRHARQNPRHSCRARRRPPHVAGLTSGSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15057; Mature: 15057
Theoretical pI: Translated: 12.91; Mature: 12.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARPNDGGGHGPAGSETSRAGITRIGCEGSLSASSRIRPCRLGRPGTREAPLFRRRSL CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC DHKSGNGRKPRAAANSPGARRRWHNAAGNRRAGGIVAARTSPRRSRIKRRLRHARQNPRH CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHH SCRARRRPPHVAGLTSGSS HHHHCCCCCCEECCCCCCC >Mature Secondary Structure MRAARPNDGGGHGPAGSETSRAGITRIGCEGSLSASSRIRPCRLGRPGTREAPLFRRRSL CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC DHKSGNGRKPRAAANSPGARRRWHNAAGNRRAGGIVAARTSPRRSRIKRRLRHARQNPRH CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHH SCRARRRPPHVAGLTSGSS HHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA