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The map label for this gene is 237814030

Identifier: 237814030

GI number: 237814030

Start: 3676967

End: 3678373

Strand: Direct

Name: 237814030

Synonym: GBP346_A3814

Alternate gene names: NA

Gene position: 3676967-3678373 (Clockwise)

Preceding gene: 237814029

Following gene: 237814031

Centisome position: 89.71

GC content: 65.39

Gene sequence:

>1407_bases
TTGCCGAACGCGACGCGAATTAACCGACCAACGGCCCAATCACATTTAAGCGGATTTGACATGAGTTATTCGGCCAAGGT
GCTCTGGGGAGAAGGCCTCTTTCTGAGGCCGCAGCACTTTCAGCGGCAGGACGCGTATCACGAAGCGCGCCTGTTCGAAT
CGATCCAGGCGATCCAGCCGTACAACTGGGGCGTGCGTTCGGTGCGGTTCGATCGCGACGCGCTCGGCAGCAACGTGCTG
CGCGCGAGCGAACTGTCGCTCGTGTTTCCGGACGGCGCGCTCTACTCCGCGCCGCAAGCCGACGAACTGCCGCCGCCCAT
CGCGCTCGACACGCTGCCCGAAGGCATCAACGAATTCACGTTCTACCTCGCGCTGCACCCGCTGCGCGAGACCGGCTCGA
ACTACGCGGACGACCGCGACGCCGGCTTCGTGTCGCGCTTCGTCAGCGAACAGGCGAGCGTTGCCGATCACTTCACCGAC
GCCGCGGAAGCGGACATCACGTTCCTGAAGACGAACGTGAAGCTGATCGCGCACAGCGAGCCGCGCGACCAGTTGCTGTC
GATCCCGCTCGTACGCGTGCGCCGCACCGCGACGTCCGGCTTCGAGATCGACGACGGCTTCGTGCCGCCGTGCCTCGCGA
TCGAGGCGTCGCCGATCCTGCACCAGCGCCTGCGCCAGTTGATCGACGCGCTGCAGGCGAAGGTGAATGCACTGTACGGT
TTCCATCGCGAGCCGACGAAGAACATCATCGAGTTCCGCTCGGGCGACATCGCATCGTTCTGGCTGCTGCACACGGCGAG
CGCCGCGTTCGCCGCGCTCGCGCACCTGCACCAGCATTCGGCCTTGCATCCGGAGCGGCTGTTCCAGGAACTACTGCGCC
TCGCGGGCCAGTTGATGACGTTCTCGAAGGGCTACGTGCTCGCCGATCTGCCCGCGTACCGGCATGACGATCCGGGCCCG
GGCTTCGCGCGGCTCGATTCGATCCTGCGCGAGCTGCTCGAGACCGTGATCTCGACGCGCTACTTCGCGATCACGCTCGA
GGAAGTGCGGCCGTCGTTCCATGTCGGGCGGCTCGACTCGGGCAAGATCGACGACAAGACCGCGTTCTATCTCGCGGTGT
CGGCCGACATGCCGTCGGTCGAACTCGTCGATGCGGTGCCCGCGCGCTTCAAGGTGGGCGCGCCGGACGACGTCGACAAG
CTCGTGCTCTCCGCGATGCCGGGCGTGCGCCTCGCGTACACGCCGCAGGTGCCGCCCGCGATTCCCGTGCGCCCGGGCGC
ATGCTATTTCGCACTCGATACGCGCAGCCCGCTCTATGAGCGGATGCTGCAGGCCCAGTCGGCGATGATCTATGCGCCGT
CCGGAATCAACGATCTCAAATTCGAACTGATCGCCGTCACGTCATGA

Upstream 100 bases:

>100_bases
AGGCATGCCGACGCAGCGGCTCGATTTGCTGTCGTCGGTGAACTGCGGGTGAAATTCGAGATGACGCCAGAAAGTCATTT
GACAAAGATTAACGATTCGC

Downstream 100 bases:

>100_bases
GTTACGCGCCCTCCCTCTTCGGCGGCAACACGCCGCCCCCCGCGCCGCAAACGGCTTCGTCGACCGACGCCGGCTTCCAG
GCGCGCTCGCTCGTCGATCT

Product: type VI secretion protein, VC_A0110 family

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MPNATRINRPTAQSHLSGFDMSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVL
RASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTD
AAEADITFLKTNVKLIAHSEPRDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYG
FHREPTKNIIEFRSGDIASFWLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGP
GFARLDSILRELLETVISTRYFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDK
LVLSAMPGVRLAYTPQVPPAIPVRPGACYFALDTRSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS

Sequences:

>Translated_468_residues
MPNATRINRPTAQSHLSGFDMSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVL
RASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTD
AAEADITFLKTNVKLIAHSEPRDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYG
FHREPTKNIIEFRSGDIASFWLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGP
GFARLDSILRELLETVISTRYFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDK
LVLSAMPGVRLAYTPQVPPAIPVRPGACYFALDTRSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS
>Mature_467_residues
PNATRINRPTAQSHLSGFDMSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVLR
ASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTDA
AEADITFLKTNVKLIAHSEPRDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGF
HREPTKNIIEFRSGDIASFWLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGPG
FARLDSILRELLETVISTRYFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKL
VLSAMPGVRLAYTPQVPPAIPVRPGACYFALDTRSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51985; Mature: 51853

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNATRINRPTAQSHLSGFDMSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQP
CCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCC
YNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFT
CCCCCCEEEECHHHHCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHE
FYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTDAAEADITFLKTNVKLIAHSE
EEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEECEEEEECCC
PRDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYG
CHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHC
FHREPTKNIIEFRSGDIASFWLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMT
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FSKGYVLADLPAYRHDDPGPGFARLDSILRELLETVISTRYFAITLEEVRPSFHVGRLDS
HCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCEEECCCCC
GKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPA
CCCCCCEEEEEEEECCCCCCHHHHCCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCC
IPVRPGACYFALDTRSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS
CCCCCCCEEEEECCCCHHHHHHHHHCCCEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure 
PNATRINRPTAQSHLSGFDMSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQP
CCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCC
YNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFT
CCCCCCEEEECHHHHCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHE
FYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTDAAEADITFLKTNVKLIAHSE
EEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEECEEEEECCC
PRDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYG
CHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHC
FHREPTKNIIEFRSGDIASFWLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMT
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FSKGYVLADLPAYRHDDPGPGFARLDSILRELLETVISTRYFAITLEEVRPSFHVGRLDS
HCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCEEECCCCC
GKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPA
CCCCCCEEEEEEEECCCCCCHHHHCCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCC
IPVRPGACYFALDTRSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS
CCCCCCCEEEEECCCCHHHHHHHHHCCCEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA