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The map label for this gene is 237814024

Identifier: 237814024

GI number: 237814024

Start: 3672619

End: 3673122

Strand: Reverse

Name: 237814024

Synonym: GBP346_A3808

Alternate gene names: NA

Gene position: 3673122-3672619 (Counterclockwise)

Preceding gene: 237814025

Following gene: 237814023

Centisome position: 89.62

GC content: 61.9

Gene sequence:

>504_bases
ATGTTACACATGCATTTGAAGTTCGGTAGTCCCGCCATCAAGGGCGAGTCCGCCGACAAGGACCACGAAGGCTGGATCGA
GCTGAAATCCTGGGATCACTCGATCGTTCAGCCGCGTTCGGCGACCGCGTCGACGGCGGGCGGCCACACGGCGACGCGTT
GCGAGCACGGCGACATGGTGTTCACGAAGGAAATCGATTCGTCGAGCCCGCTGCTGTATCAGCACGCGTCGGGCGGCACC
ACGTTCGACGAAGTGACGATCGATTTCCTGCGCGCGGACGGCGAAGGCCAGCGCGTGAAGTATCTCGAGATCAAGCTGAA
GTACGTGATCATCTCGAGCATCGCGCCGAGCGTGCATACCGAAGGCCTGCCGGTCGAGACCTTCTCGCTGAAGTACGCCG
CGGTCCAGTGGAAGCAGACGCAGCAGAAGATCGGCGGCAACCAGGGCGGCAACACGCAGGGCGCCTGGAGCCTCACGAAG
AACGACAAGACCTACGCGGTCTAA

Upstream 100 bases:

>100_bases
TGATCTGCCCAAACCGGCAAATTCATAAGCGAGCTGAGATCGCCCGGGCGGGCCGCCTGGGTAGGACGTTAAAACCACCT
CTTTGGGGAGTCGAAAGACC

Downstream 100 bases:

>100_bases
GTTCGACGCGGGAACGGGGCACGGTGCGTGCCCCGTTCCCGTTTTGCTTGCTGCCCGATGAAACGTTTCGAACCGAGCTT
CCTCGACAAGCTGTTCGACG

Product: type VI secretion system effector, Hcp1 family

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMVFTKEIDSSSPLLYQHASGGT
TFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHTEGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTK
NDKTYAV

Sequences:

>Translated_167_residues
MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMVFTKEIDSSSPLLYQHASGGT
TFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHTEGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTK
NDKTYAV
>Mature_167_residues
MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMVFTKEIDSSSPLLYQHASGGT
TFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHTEGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTK
NDKTYAV

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18335; Mature: 18335

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMV
CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEE
FTKEIDSSSPLLYQHASGGTTFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHT
EEEECCCCCCEEEEECCCCCCHHHEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCC
EGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTKNDKTYAV
CCCCEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEECC
>Mature Secondary Structure
MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMV
CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEE
FTKEIDSSSPLLYQHASGGTTFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHT
EEEECCCCCCEEEEECCCCCCHHHEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCC
EGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTKNDKTYAV
CCCCEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA