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The map label for this gene is vasA_3

Identifier: 237814022

GI number: 237814022

Start: 3670162

End: 3672000

Strand: Reverse

Name: vasA_3

Synonym: GBP346_A3806

Alternate gene names: NA

Gene position: 3672000-3670162 (Counterclockwise)

Preceding gene: 237814023

Following gene: 237814021

Centisome position: 89.59

GC content: 67.05

Gene sequence:

>1839_bases
ATGGAAGAGTTGTTGCCGTATTACGAACGCGAACTGTCGTTTCTGCGGCGCTATTCGCTCGAATTCGCGAACCGTTACCC
GAAGATCGCCGCGCGTCTCGCCCAGACGGGCGAGCAGTGCGAGGATCCGCACGTCGAGCGGATGATCGAATCGTTCGCGC
TGCTCGGCGCGCGGATCAACAAGAAGCTCGACGACGAATATCCCGAGTTCACCGAAGCGCTCGTCGAAGTCCTCTACCCG
CACTATCTGCGGCCGTTCCCGTCATGCTCGATCGCGCAGTTCGGTGCGCCGCATGCGTTCGCGGAGCTCACCGAGCCGCG
GATCGTCGAGCGCGGCACCGAGCTGAAGAGCCGCGCGATTCGCGGCGTGCAGTGCCGGTTCCGCACCGCATACGACGTGA
CGCTCGCGCCGATCCGGCTCGCCGATGCGCGCTACGGATCGGTCGCGGTGGCGCCCGCCGCAGCAAGGCTGCCCGGCAAC
GCGACGGGCGTGATCTCGATCGCGTTCGAATCGACGTCGCCGCAGCTCGATCTCGCCGCGCTGAAGCTCGGCAAGCTGCG
CGCGCATTTGCACGGCGAGCAATCGTTCGTCGCCGCGCTGGCCGATTGCCTGTTCGCGCACGCGCTCGCCTGCTACGTCG
AGCCCGATCGCGGCGGCCGCTGGATCGCGCTCGGCAAGACGCCGTTCGAGCACGCGGGCTTCGACGAGACCGACGCGCTG
ATCGACTATCCGGCCCGTTCGCACCCGGCCTATCGGCTGCTGACCGAATACTTCGCATTCCCGGATAAATTCAACTTCGT
CGATTTCGATCTGGGCGCGCTCGCGCGGCGCGCGGGGCCCTGCCGGCAGCTGACGCTGCACATCGCGCTGCGCGACGTGC
GCGGCGATTCGCATGTCGCGCGGCTGCTCGATCTGCTGAGCGCGAGCCATTTCCGGCTCTTCTGCACGCCGGTCGTGAAC
CTGTTCCGCCAGCACGGCGAGCCGATTCGGGTCGACCACCGGGCGGTGTCGTACCCGGTGATCGGCGATGCGCGCCGCGC
GTTCGCGTACGAGGTATATTCGATCGATTCGGTGCATCTCGTGCGGCAGCGCGCGGACCGCGAAACGCTCGTCGAATTCC
GGCCGTTCTATTCGCTGCATCACGGCGAAGCCGCGCAGGCCGGCCACTACTGGTTCGCGCGGCGCAACGACGACGTCGCG
CGCAAGAGCCCCGGCTACGAGACCGAGATTTCGGTCGTCGACGTCGACTTCGAGCCGGGCGCGCCGCAAACCGATACGTT
GAGCCTCGATCTCACCTGTACGAACCGCGACCTGCCGGCCGCGCTCGCGACGGGGCTCGACGGCGGCGATCTCTTCATCG
ACGGCGGCGAGCAGCCCGGCCCGATCGCGCTATTGCGCCGGCCGACGCCGAGCGCGCGCTTCGAGCGCGGCCACGCCGCG
CACTGGCGCCTCGTGTCGCATCTCGCGCTCAATCACGTGTCGCTTGCCGAAGAAGGGCTCGCCGCGCTGAAGGAAGCGCT
CGTGCTGTACGATCTGAGGCGCTCCGCGGTGTCGACGCGCCATATCGACGGGATCGTCGGCATCGAGCAGAAGAGCGCGG
TGCAATGGCTGCCGGGCAAGCCGTTCGCGACGTTCGTGCGCGGCGTCGAGATCCGGCTCGCGATCGACGACGAACATTTC
GTCGGCTCGAGCCTCGCGACGTTCGTGCGGATGATCGACGCGTTCTTCGGGCTGTACGTGCACCTCAACAGCTTTGTTCA
ACTGATCGTCGTGTCCAGGCGCACCGGCGAGGAGATCATGCGATGCAAACCGCGCAGCGGCGAATCGATCCTGGCGTAG

Upstream 100 bases:

>100_bases
TTCGCGCGCCGCCAAGGTGTGAGCCGTATCGCGCGGGCTGCCGGGCGCCGCGCGGCATCGAGAAGCCCGGCACGGGGCGT
CAAGGTTTCGGGGATCGTCG

Downstream 100 bases:

>100_bases
TCGAGCGGCTGCTCGACGAGCCGCATCGCTTCGAGTTCTTTCAGGCGGTGCGGCTGCTCGAGACCTGGTTCGCGAAGCAC
GATGCGCCGCGCCACGCGGC

Product: type VI secretion protein, VC_A0110 family

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 612; Mature: 612

Protein sequence:

>612_residues
MEELLPYYERELSFLRRYSLEFANRYPKIAARLAQTGEQCEDPHVERMIESFALLGARINKKLDDEYPEFTEALVEVLYP
HYLRPFPSCSIAQFGAPHAFAELTEPRIVERGTELKSRAIRGVQCRFRTAYDVTLAPIRLADARYGSVAVAPAAARLPGN
ATGVISIAFESTSPQLDLAALKLGKLRAHLHGEQSFVAALADCLFAHALACYVEPDRGGRWIALGKTPFEHAGFDETDAL
IDYPARSHPAYRLLTEYFAFPDKFNFVDFDLGALARRAGPCRQLTLHIALRDVRGDSHVARLLDLLSASHFRLFCTPVVN
LFRQHGEPIRVDHRAVSYPVIGDARRAFAYEVYSIDSVHLVRQRADRETLVEFRPFYSLHHGEAAQAGHYWFARRNDDVA
RKSPGYETEISVVDVDFEPGAPQTDTLSLDLTCTNRDLPAALATGLDGGDLFIDGGEQPGPIALLRRPTPSARFERGHAA
HWRLVSHLALNHVSLAEEGLAALKEALVLYDLRRSAVSTRHIDGIVGIEQKSAVQWLPGKPFATFVRGVEIRLAIDDEHF
VGSSLATFVRMIDAFFGLYVHLNSFVQLIVVSRRTGEEIMRCKPRSGESILA

Sequences:

>Translated_612_residues
MEELLPYYERELSFLRRYSLEFANRYPKIAARLAQTGEQCEDPHVERMIESFALLGARINKKLDDEYPEFTEALVEVLYP
HYLRPFPSCSIAQFGAPHAFAELTEPRIVERGTELKSRAIRGVQCRFRTAYDVTLAPIRLADARYGSVAVAPAAARLPGN
ATGVISIAFESTSPQLDLAALKLGKLRAHLHGEQSFVAALADCLFAHALACYVEPDRGGRWIALGKTPFEHAGFDETDAL
IDYPARSHPAYRLLTEYFAFPDKFNFVDFDLGALARRAGPCRQLTLHIALRDVRGDSHVARLLDLLSASHFRLFCTPVVN
LFRQHGEPIRVDHRAVSYPVIGDARRAFAYEVYSIDSVHLVRQRADRETLVEFRPFYSLHHGEAAQAGHYWFARRNDDVA
RKSPGYETEISVVDVDFEPGAPQTDTLSLDLTCTNRDLPAALATGLDGGDLFIDGGEQPGPIALLRRPTPSARFERGHAA
HWRLVSHLALNHVSLAEEGLAALKEALVLYDLRRSAVSTRHIDGIVGIEQKSAVQWLPGKPFATFVRGVEIRLAIDDEHF
VGSSLATFVRMIDAFFGLYVHLNSFVQLIVVSRRTGEEIMRCKPRSGESILA
>Mature_612_residues
MEELLPYYERELSFLRRYSLEFANRYPKIAARLAQTGEQCEDPHVERMIESFALLGARINKKLDDEYPEFTEALVEVLYP
HYLRPFPSCSIAQFGAPHAFAELTEPRIVERGTELKSRAIRGVQCRFRTAYDVTLAPIRLADARYGSVAVAPAAARLPGN
ATGVISIAFESTSPQLDLAALKLGKLRAHLHGEQSFVAALADCLFAHALACYVEPDRGGRWIALGKTPFEHAGFDETDAL
IDYPARSHPAYRLLTEYFAFPDKFNFVDFDLGALARRAGPCRQLTLHIALRDVRGDSHVARLLDLLSASHFRLFCTPVVN
LFRQHGEPIRVDHRAVSYPVIGDARRAFAYEVYSIDSVHLVRQRADRETLVEFRPFYSLHHGEAAQAGHYWFARRNDDVA
RKSPGYETEISVVDVDFEPGAPQTDTLSLDLTCTNRDLPAALATGLDGGDLFIDGGEQPGPIALLRRPTPSARFERGHAA
HWRLVSHLALNHVSLAEEGLAALKEALVLYDLRRSAVSTRHIDGIVGIEQKSAVQWLPGKPFATFVRGVEIRLAIDDEHF
VGSSLATFVRMIDAFFGLYVHLNSFVQLIVVSRRTGEEIMRCKPRSGESILA

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68373; Mature: 68373

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELLPYYERELSFLRRYSLEFANRYPKIAARLAQTGEQCEDPHVERMIESFALLGARIN
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
KKLDDEYPEFTEALVEVLYPHYLRPFPSCSIAQFGAPHAFAELTEPRIVERGTELKSRAI
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHCCCCHHHHCCHHHHHHHH
RGVQCRFRTAYDVTLAPIRLADARYGSVAVAPAAARLPGNATGVISIAFESTSPQLDLAA
CCEEEEEEEEEEEEEEEEEEECCCCCCEEECCHHHCCCCCCCEEEEEEEECCCCCCHHHH
LKLGKLRAHLHGEQSFVAALADCLFAHALACYVEPDRGGRWIALGKTPFEHAGFDETDAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCCCCCHH
IDYPARSHPAYRLLTEYFAFPDKFNFVDFDLGALARRAGPCRQLTLHIALRDVRGDSHVA
EECCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHCCCCCCEEEEEEEEEECCCCHHHH
RLLDLLSASHFRLFCTPVVNLFRQHGEPIRVDHRAVSYPVIGDARRAFAYEVYSIDSVHL
HHHHHHCCCCCEEEHHHHHHHHHHCCCCEEECCEEEECCCCCCCHHHHEEEEEECCHHHH
VRQRADRETLVEFRPFYSLHHGEAAQAGHYWFARRNDDVARKSPGYETEISVVDVDFEPG
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHCCCCCCEEEEEEEEECCCC
APQTDTLSLDLTCTNRDLPAALATGLDGGDLFIDGGEQPGPIALLRRPTPSARFERGHAA
CCCCCEEEEEEEECCCCCCHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCHHCCCCHH
HWRLVSHLALNHVSLAEEGLAALKEALVLYDLRRSAVSTRHIDGIVGIEQKSAVQWLPGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
PFATFVRGVEIRLAIDDEHFVGSSLATFVRMIDAFFGLYVHLNSFVQLIVVSRRTGEEIM
CHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RCKPRSGESILA
HCCCCCCCCCCC
>Mature Secondary Structure
MEELLPYYERELSFLRRYSLEFANRYPKIAARLAQTGEQCEDPHVERMIESFALLGARIN
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
KKLDDEYPEFTEALVEVLYPHYLRPFPSCSIAQFGAPHAFAELTEPRIVERGTELKSRAI
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHCCCCHHHHCCHHHHHHHH
RGVQCRFRTAYDVTLAPIRLADARYGSVAVAPAAARLPGNATGVISIAFESTSPQLDLAA
CCEEEEEEEEEEEEEEEEEEECCCCCCEEECCHHHCCCCCCCEEEEEEEECCCCCCHHHH
LKLGKLRAHLHGEQSFVAALADCLFAHALACYVEPDRGGRWIALGKTPFEHAGFDETDAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCCCCCHH
IDYPARSHPAYRLLTEYFAFPDKFNFVDFDLGALARRAGPCRQLTLHIALRDVRGDSHVA
EECCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHCCCCCCEEEEEEEEEECCCCHHHH
RLLDLLSASHFRLFCTPVVNLFRQHGEPIRVDHRAVSYPVIGDARRAFAYEVYSIDSVHL
HHHHHHCCCCCEEEHHHHHHHHHHCCCCEEECCEEEECCCCCCCHHHHEEEEEECCHHHH
VRQRADRETLVEFRPFYSLHHGEAAQAGHYWFARRNDDVARKSPGYETEISVVDVDFEPG
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHCCCCCCEEEEEEEEECCCC
APQTDTLSLDLTCTNRDLPAALATGLDGGDLFIDGGEQPGPIALLRRPTPSARFERGHAA
CCCCCEEEEEEEECCCCCCHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCHHCCCCHH
HWRLVSHLALNHVSLAEEGLAALKEALVLYDLRRSAVSTRHIDGIVGIEQKSAVQWLPGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
PFATFVRGVEIRLAIDDEHFVGSSLATFVRMIDAFFGLYVHLNSFVQLIVVSRRTGEEIM
CHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RCKPRSGESILA
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA