| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237814012
Identifier: 237814012
GI number: 237814012
Start: 3656952
End: 3657920
Strand: Reverse
Name: 237814012
Synonym: GBP346_A3796
Alternate gene names: NA
Gene position: 3657920-3656952 (Counterclockwise)
Preceding gene: 237814019
Following gene: 237814007
Centisome position: 89.25
GC content: 72.76
Gene sequence:
>969_bases ATGAGCGCGCCGGACGATTCGAATTCGAAAGCCCCGCCTAGCCTGCTTTCCTCCGATGCCGGCAAAGGGAGCGGCGCAAA CCACTCGCGTATTCTCGCGAATCTCGAAGGCCGCGTCTCCCCCCAGACCGAAAACGCGCCGCGTTCGCGCAAAGGGCCGA TCGCGCTGATTGCGCTCGCCGTCGTCGCGATAGCCGGGTGGGGGGCATGGCGATTGCAGCAGCCTTCCGCCGATTCTGCC GAAGTCGCGGCCGCGGCGTCGGCGCCCGCCGTCGCCGCGGCGCCCGCGAGCCGCGCGGCGCCGGCGAGCGCGGCGCAGAT CGCACCGGCATCGGCGCCGCAGCCTGCGACGATCGTCAACGACGAGAGCGCCGCAAGCGCAGCGAAACCGGCCGTTGCGG CATCGGCCGGCGACGGGAGCCGGCTGTCGCGCGCGCTTGCGAACGGCGCGTCGGACGTGTCGACGGCCGGCGCGGCAGCG GGCGCGACAGCCGCCGCAGCGGCCGTGGCGGCGGCGAAGCCGGCGAAGAGCGTGGAGAAGCGCGCCGCCGCGAAGCCGGA CAAGCAGGACGCGGCGCACGCGAAGGCAGAGGCCGCGGCGCGCAAGCGCCACGAAAAGGCTCAGGCTGCGGACGCCGCGC AGGCGAAGAAGTCGCGCCGCGAGGCCGCCGCGAAGAAGAACGGAAAGGACGATCCGGACGCCGATCTGCTCGCCGCGCTC GTCGCGCGCACGAAGCCGGCCGATGCGACGAAGCCCGCCGATGCGGCGAAGCCGAGCACGAGCGCGGCGCCGAAGAAGGC GGCTGCGGCGGCAATCACCTCGGCCGATACCTCGCTTGCCGCGCGCGTGAAGGCGTGCAGCGAGCGCGGCTTCTTCGAGG ATCAGCTGTGCCGCTGGCGCGTATGCGAGAACCACTGGGGCAAGGATCCGGCGTGCCCGACTTCCGCGACGCAAAACCGC CAGCCGTGA
Upstream 100 bases:
>100_bases TTGTAATTTGCAATGCTTGAACTTAGAATCAGGCCTGCTTCCGCGTAGGCCGGGACAATATTATTGCGGCGAATTAAACC AGGATTCAACGAGACACTGA
Downstream 100 bases:
>100_bases CGCGATGCGCGCGCCGCGACGTGAACGTAAACGTGAACGCGTCGCGCTTTTGAGCCGGCATCTCACGCCGAATCTTCAAT CTTTCTTTTTCTCGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSAPDDSNSKAPPSLLSSDAGKGSGANHSRILANLEGRVSPQTENAPRSRKGPIALIALAVVAIAGWGAWRLQQPSADSA EVAAAASAPAVAAAPASRAAPASAAQIAPASAPQPATIVNDESAASAAKPAVAASAGDGSRLSRALANGASDVSTAGAAA GATAAAAAVAAAKPAKSVEKRAAAKPDKQDAAHAKAEAAARKRHEKAQAADAAQAKKSRREAAAKKNGKDDPDADLLAAL VARTKPADATKPADAAKPSTSAAPKKAAAAAITSADTSLAARVKACSERGFFEDQLCRWRVCENHWGKDPACPTSATQNR QP
Sequences:
>Translated_322_residues MSAPDDSNSKAPPSLLSSDAGKGSGANHSRILANLEGRVSPQTENAPRSRKGPIALIALAVVAIAGWGAWRLQQPSADSA EVAAAASAPAVAAAPASRAAPASAAQIAPASAPQPATIVNDESAASAAKPAVAASAGDGSRLSRALANGASDVSTAGAAA GATAAAAAVAAAKPAKSVEKRAAAKPDKQDAAHAKAEAAARKRHEKAQAADAAQAKKSRREAAAKKNGKDDPDADLLAAL VARTKPADATKPADAAKPSTSAAPKKAAAAAITSADTSLAARVKACSERGFFEDQLCRWRVCENHWGKDPACPTSATQNR QP >Mature_321_residues SAPDDSNSKAPPSLLSSDAGKGSGANHSRILANLEGRVSPQTENAPRSRKGPIALIALAVVAIAGWGAWRLQQPSADSAE VAAAASAPAVAAAPASRAAPASAAQIAPASAPQPATIVNDESAASAAKPAVAASAGDGSRLSRALANGASDVSTAGAAAG ATAAAAAVAAAKPAKSVEKRAAAKPDKQDAAHAKAEAAARKRHEKAQAADAAQAKKSRREAAAKKNGKDDPDADLLAALV ARTKPADATKPADAAKPSTSAAPKKAAAAAITSADTSLAARVKACSERGFFEDQLCRWRVCENHWGKDPACPTSATQNRQ P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31936; Mature: 31805
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDDSNSKAPPSLLSSDAGKGSGANHSRILANLEGRVSPQTENAPRSRKGPIALIALA CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHECCCCCCCCCCCCCCCCCCCCHHHHHHH VVAIAGWGAWRLQQPSADSAEVAAAASAPAVAAAPASRAAPASAAQIAPASAPQPATIVN HHHHHCCCHHEECCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCEEEC DESAASAAKPAVAASAGDGSRLSRALANGASDVSTAGAAAGATAAAAAVAAAKPAKSVEK CCHHHHHHCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAKPDKQDAAHAKAEAAARKRHEKAQAADAAQAKKSRREAAAKKNGKDDPDADLLAAL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VARTKPADATKPADAAKPSTSAAPKKAAAAAITSADTSLAARVKACSERGFFEDQLCRWR HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VCENHWGKDPACPTSATQNRQP HHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAPDDSNSKAPPSLLSSDAGKGSGANHSRILANLEGRVSPQTENAPRSRKGPIALIALA CCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHECCCCCCCCCCCCCCCCCCCCHHHHHHH VVAIAGWGAWRLQQPSADSAEVAAAASAPAVAAAPASRAAPASAAQIAPASAPQPATIVN HHHHHCCCHHEECCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCEEEC DESAASAAKPAVAASAGDGSRLSRALANGASDVSTAGAAAGATAAAAAVAAAKPAKSVEK CCHHHHHHCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAKPDKQDAAHAKAEAAARKRHEKAQAADAAQAKKSRREAAAKKNGKDDPDADLLAAL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VARTKPADATKPADAAKPSTSAAPKKAAAAAITSADTSLAARVKACSERGFFEDQLCRWR HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VCENHWGKDPACPTSATQNRQP HHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA