| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813998
Identifier: 237813998
GI number: 237813998
Start: 3645801
End: 3646280
Strand: Direct
Name: 237813998
Synonym: GBP346_A3783
Alternate gene names: NA
Gene position: 3645801-3646280 (Clockwise)
Preceding gene: 237813996
Following gene: 237814000
Centisome position: 88.95
GC content: 74.58
Gene sequence:
>480_bases ATGGCTGGATCGATCGTACGGCGGGCGCTGCGCGCGAAACGGCGACACGCGCAGACCTCGGCGCATACGGACGCGCCGAG CGGCATCGCCGCCTCGTCACCACACCGTAACGCACGGCGCGCGCGCTTTCCGTGCGGCACCGCACGCAGCGGCGCCCGGC CGGCAGGATCGATCAGTCAGGCGGCATCGCGCGCGGCCGGCGCACGTCTGCTTGCGCGCCTGCTCGCGGCCGCAGGCGGA ACGCGCTCGCCCGACGAGCGCATCGCGCGCGACGCGCGTTGCAATGCATGCTTCGTGCCGTACGCTCCGCCCGCCGGCGA ATCACGGCTGCCGCAACAGCGTACGGAGGCCGCGCGTCACGCACCGCGACCTCGAACGGCGGCCGATCGCCGCGTGCGCG AGGCAAGCGGCGGCGGCATACCGTCCGCGCGCGCGACGCTCAATAGCCGCCGCCATACCCGCCCGACGCCGGCAAGCTGA
Upstream 100 bases:
>100_bases GTCGAACAGCTCGGCGTAATGCGTCCACATGACGAACAGCACGGCGACGGCGCGCATCGCATCGACGTGCGCGAAACGGC TCGGGCGGGTGGAATCGGAC
Downstream 100 bases:
>100_bases GCGTGCCCGAATCGGTAAAGCGCACGCTGCCGAACATTCCACCCGCGAGCTTGCCGCGCAACACATACGGCAGCTTGCCG GACACCGTTGCATCCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MAGSIVRRALRAKRRHAQTSAHTDAPSGIAASSPHRNARRARFPCGTARSGARPAGSISQAASRAAGARLLARLLAAAGG TRSPDERIARDARCNACFVPYAPPAGESRLPQQRTEAARHAPRPRTAADRRVREASGGGIPSARATLNSRRHTRPTPAS
Sequences:
>Translated_159_residues MAGSIVRRALRAKRRHAQTSAHTDAPSGIAASSPHRNARRARFPCGTARSGARPAGSISQAASRAAGARLLARLLAAAGG TRSPDERIARDARCNACFVPYAPPAGESRLPQQRTEAARHAPRPRTAADRRVREASGGGIPSARATLNSRRHTRPTPAS >Mature_158_residues AGSIVRRALRAKRRHAQTSAHTDAPSGIAASSPHRNARRARFPCGTARSGARPAGSISQAASRAAGARLLARLLAAAGGT RSPDERIARDARCNACFVPYAPPAGESRLPQQRTEAARHAPRPRTAADRRVREASGGGIPSARATLNSRRHTRPTPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16722; Mature: 16591
Theoretical pI: Translated: 12.62; Mature: 12.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSIVRRALRAKRRHAQTSAHTDAPSGIAASSPHRNARRARFPCGTARSGARPAGSISQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHH AASRAAGARLLARLLAAAGGTRSPDERIARDARCNACFVPYAPPAGESRLPQQRTEAARH HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHC APRPRTAADRRVREASGGGIPSARATLNSRRHTRPTPAS CCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AGSIVRRALRAKRRHAQTSAHTDAPSGIAASSPHRNARRARFPCGTARSGARPAGSISQ CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHH AASRAAGARLLARLLAAAGGTRSPDERIARDARCNACFVPYAPPAGESRLPQQRTEAARH HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHC APRPRTAADRRVREASGGGIPSARATLNSRRHTRPTPAS CCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA