| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813993
Identifier: 237813993
GI number: 237813993
Start: 3641459
End: 3642082
Strand: Direct
Name: 237813993
Synonym: GBP346_A3777
Alternate gene names: NA
Gene position: 3641459-3642082 (Clockwise)
Preceding gene: 237813992
Following gene: 237813996
Centisome position: 88.85
GC content: 65.87
Gene sequence:
>624_bases ATGACCGAAGTCTCTCCGCCCGACGCCGACATCCTCGCCGCCACCCGCCACTGGCTGACGCGCGCGGTGATCGGGCTCAA CCTGTGTCCGTTCGCGAAGGGCGTCCACGTGAAGCGGCAGATCCGCTACGCGATCAGCCGCGCGAGATCGCTCGAAGCGG CACTGACGGATCTGGAAAACGAACTGCGCCATCTCGATGCCGCCGATCCGGACGAAGTCGACACGACGCTCGTGATCTTT CCGAACGCGTTCGGCAATTTCCTCGACTACAACGATGCGCTATGGTTCGCCGATCGCCTGCTGCGGCAATTGCGCCTCGA CGGCACGCTGCAGATCGCAAGCTTCCACCCGCGCTACCAATTCGACGGCACCGAGCCCGACGACATCGAGAACTACACGA ACCGCGCGCCGTATCCGATCCTGCACTTGCTGCGCGAGACGAGCATCGAGCGGGCGGTCGACGCGTTCCCCGACGCGGCC GACATCTACGAACGCAATCAGGCGACGATGCGCCGCCTCGGCCACGCGGGCTGGCGCGACTGGATGGCGCAGCGCGGCGA CGAAGAGGACTCGCGCGAGAACGGGAACGCAGGCAAGCCCGAAGGCAGCAGCGCAGCGAACTAG
Upstream 100 bases:
>100_bases CACGCGTCGTATCAGGTCGCATCCTGTCGCGTCGCCTCGCCGCATACCGCGCCGCCTTCGCCCGCTACAATCGCGGCTTG ACCGCCACGCCGTTTCCGCC
Downstream 100 bases:
>100_bases CGCGAACCACGCAGGCACGCCGCCGAGTGCTTGCGCTTCGTGCGCGGCAAGCGGCGCCGCGCGCCACGCATTACGCTCGG GAAATCACGCGCGCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTEVSPPDADILAATRHWLTRAVIGLNLCPFAKGVHVKRQIRYAISRARSLEAALTDLENELRHLDAADPDEVDTTLVIF PNAFGNFLDYNDALWFADRLLRQLRLDGTLQIASFHPRYQFDGTEPDDIENYTNRAPYPILHLLRETSIERAVDAFPDAA DIYERNQATMRRLGHAGWRDWMAQRGDEEDSRENGNAGKPEGSSAAN
Sequences:
>Translated_207_residues MTEVSPPDADILAATRHWLTRAVIGLNLCPFAKGVHVKRQIRYAISRARSLEAALTDLENELRHLDAADPDEVDTTLVIF PNAFGNFLDYNDALWFADRLLRQLRLDGTLQIASFHPRYQFDGTEPDDIENYTNRAPYPILHLLRETSIERAVDAFPDAA DIYERNQATMRRLGHAGWRDWMAQRGDEEDSRENGNAGKPEGSSAAN >Mature_206_residues TEVSPPDADILAATRHWLTRAVIGLNLCPFAKGVHVKRQIRYAISRARSLEAALTDLENELRHLDAADPDEVDTTLVIFP NAFGNFLDYNDALWFADRLLRQLRLDGTLQIASFHPRYQFDGTEPDDIENYTNRAPYPILHLLRETSIERAVDAFPDAAD IYERNQATMRRLGHAGWRDWMAQRGDEEDSRENGNAGKPEGSSAAN
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23435; Mature: 23304
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVSPPDADILAATRHWLTRAVIGLNLCPFAKGVHVKRQIRYAISRARSLEAALTDLEN CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ELRHLDAADPDEVDTTLVIFPNAFGNFLDYNDALWFADRLLRQLRLDGTLQIASFHPRYQ HHHHCCCCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC FDGTEPDDIENYTNRAPYPILHLLRETSIERAVDAFPDAADIYERNQATMRRLGHAGWRD CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHH WMAQRGDEEDSRENGNAGKPEGSSAAN HHHHCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TEVSPPDADILAATRHWLTRAVIGLNLCPFAKGVHVKRQIRYAISRARSLEAALTDLEN CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ELRHLDAADPDEVDTTLVIFPNAFGNFLDYNDALWFADRLLRQLRLDGTLQIASFHPRYQ HHHHCCCCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC FDGTEPDDIENYTNRAPYPILHLLRETSIERAVDAFPDAADIYERNQATMRRLGHAGWRD CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHH WMAQRGDEEDSRENGNAGKPEGSSAAN HHHHCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA