| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813990
Identifier: 237813990
GI number: 237813990
Start: 3638500
End: 3639075
Strand: Direct
Name: 237813990
Synonym: GBP346_A3775
Alternate gene names: NA
Gene position: 3638500-3639075 (Clockwise)
Preceding gene: 237813987
Following gene: 237813992
Centisome position: 88.77
GC content: 70.14
Gene sequence:
>576_bases GTGAATCGAAACGGAAGTGGGAGCGGGTTTGACGGACATGCGTTTCCTCACCTATCTTTAAAAAGGGCTCGGTCGCCCGG AAAAAGAAACGCCAGCATAACCGCTTGTCGACGAACTTGCCGGAGCGTGCGCGCGAATGCAAATCGGCGTATGCGCAAAG GAAGACAGCGCGCGGCAAAGCGGCGGCCGGCGCGGCGTCAGTCGGCATACGGGCGGAGGCGGACCGCGCATATCGGGTTC GCGCCGGCCGTACCGGCCGGCGTTGTCCGGCGCGCGTTTGCGCAACGGTTGAAACGAACGACCGCGGCGCGCCGGCCGAT CCGGCGCGCGCGTCTTCGTCCTCACGGCGCTCGGTTATCCGCCCGGTATCCGCTCTCCGCCGCCGAGCCGCCGCCGTGCG GTTTCCGTCGCTCGCCGTCCCTCGCCACCGCGCATCGACCTTCCCGCATCGGCGCCCGCGGCGAAATCGGCCGCCGCCAC GATCGCTGCGTCGGCCGCGCCGCCCGTACCCGAGGCGCGGCCATCGCCCCGCCGTTCAAGCCGCGCTCGCCGATACCCGC GCCGTCCCCCGGTTGA
Upstream 100 bases:
>100_bases ACGGCGCCCAGCGCGCCGCTTCGAGCACGGCGTGCAGATGCTCGGCGCTGACGGGCTCGCTCGAATACGCGCGCGGGCTC CAGCGGCCGGCGATCAGTTC
Downstream 100 bases:
>100_bases TCCGCAGCACGATCAGCGCGCCGACGATGCACAGCCCGCCCGAAATCATCGACGCAACCGTATACGTGCCGAGGCTCGCG CGCAGCATGCCGGCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRQRAAKRRPARRQSAYGRRRTAHIGF APAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLSARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRH DRCVGRAARTRGAAIAPPFKPRSPIPAPSPG
Sequences:
>Translated_191_residues MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRQRAAKRRPARRQSAYGRRRTAHIGF APAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLSARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRH DRCVGRAARTRGAAIAPPFKPRSPIPAPSPG >Mature_191_residues MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRQRAAKRRPARRQSAYGRRRTAHIGF APAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLSARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRH DRCVGRAARTRGAAIAPPFKPRSPIPAPSPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21004; Mature: 21004
Theoretical pI: Translated: 12.98; Mature: 12.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRQRAAK CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRPARRQSAYGRRRTAHIGFAPAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLS HCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRHDRCVGRAARTRGAAIAPPFK CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PRSPIPAPSPG CCCCCCCCCCC >Mature Secondary Structure MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRQRAAK CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRPARRQSAYGRRRTAHIGFAPAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLS HCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRHDRCVGRAARTRGAAIAPPFK CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PRSPIPAPSPG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA