| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813967
Identifier: 237813967
GI number: 237813967
Start: 3619389
End: 3619802
Strand: Reverse
Name: 237813967
Synonym: GBP346_A3751
Alternate gene names: NA
Gene position: 3619802-3619389 (Counterclockwise)
Preceding gene: 237813969
Following gene: 237813966
Centisome position: 88.32
GC content: 73.19
Gene sequence:
>414_bases GTGCCGCGCATCGACGATCCGGTGGCTTCGCCGTCGTCCTCGCCTTGCGCGGGCGGAGCGCCGGCAACGCCGGGCGGCAT TCGTCTGCCGGCGCATGCGTTCGCGATCGCGTTCGTCGCGGCCGCCGGCGTGCGCCGGAGCGCCTTCGCGCGCCGCGCGA ACAGACGGGCGAACGGGCGCGAGGCGCGATTTTCGGGTACGGTGGCCGAACGCGATTCCGGGGGAAGCGCCCCAGGAGGA GCCGTGACATTCGACGATGTCAGCCGGATCGCGCTTGTGTGGCGCGGCGTCGAGGAGGGCATGTCGTACGGTACGCCGGC GCTCAGGGTGCGAGGCAAGTTGCTTGCGCGGCTGCGCGGAGACGGCGACACGCTCGTCGTCAAGGGCGTCGGCCCGGCGA GCGCGCGTGGCTGA
Upstream 100 bases:
>100_bases CGTGCGCGCGGTTCCATAGCGACGCGGTCGGCGCATGGGCAGCCGTGCGCTTGGGCAGCGGGAAGCTCGCGCGCGGCATC GCCATCGTCGCGCGCGCGTC
Downstream 100 bases:
>100_bases TCGAATCGTTGCCCGACTGTTCTACGTGACCGATCGCTACGTCGGCTGGCCGATCGTGCTGGTGCGCCTGTCGGCCGCGC AGCCCGACATGGTGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPRIDDPVASPSSSPCAGGAPATPGGIRLPAHAFAIAFVAAAGVRRSAFARRANRRANGREARFSGTVAERDSGGSAPGG AVTFDDVSRIALVWRGVEEGMSYGTPALRVRGKLLARLRGDGDTLVVKGVGPASARG
Sequences:
>Translated_137_residues MPRIDDPVASPSSSPCAGGAPATPGGIRLPAHAFAIAFVAAAGVRRSAFARRANRRANGREARFSGTVAERDSGGSAPGG AVTFDDVSRIALVWRGVEEGMSYGTPALRVRGKLLARLRGDGDTLVVKGVGPASARG >Mature_136_residues PRIDDPVASPSSSPCAGGAPATPGGIRLPAHAFAIAFVAAAGVRRSAFARRANRRANGREARFSGTVAERDSGGSAPGGA VTFDDVSRIALVWRGVEEGMSYGTPALRVRGKLLARLRGDGDTLVVKGVGPASARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13940; Mature: 13809
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIDDPVASPSSSPCAGGAPATPGGIRLPAHAFAIAFVAAAGVRRSAFARRANRRANGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EARFSGTVAERDSGGSAPGGAVTFDDVSRIALVWRGVEEGMSYGTPALRVRGKLLARLRG CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHCC DGDTLVVKGVGPASARG CCCEEEEEECCCCCCCC >Mature Secondary Structure PRIDDPVASPSSSPCAGGAPATPGGIRLPAHAFAIAFVAAAGVRRSAFARRANRRANGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EARFSGTVAERDSGGSAPGGAVTFDDVSRIALVWRGVEEGMSYGTPALRVRGKLLARLRG CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHCC DGDTLVVKGVGPASARG CCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA