| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813892
Identifier: 237813892
GI number: 237813892
Start: 3540686
End: 3540859
Strand: Reverse
Name: 237813892
Synonym: GBP346_A3670
Alternate gene names: NA
Gene position: 3540859-3540686 (Counterclockwise)
Preceding gene: 237813893
Following gene: 237813889
Centisome position: 86.39
GC content: 65.52
Gene sequence:
>174_bases GTGCCGCGCCTCGGTCGCGGCGGCGAAGGCGACAAAAAAGCCCGCGCATGCGGGCTTTTTGCTTTCGTCAGCCTGTCGAA CCTCGGTTTCATGGCCGGATTGTCCCGGGCGTGCTCGCGCATGAGCGCCATCGATGCGCATCGACGTGCTCGCCCGCCGG TATCCTGCATCTGA
Upstream 100 bases:
>100_bases AGCGCAAGCCGAGCGGCGAGATCGAAACGGTGCTCGGCTACATGCTCGAGCCCGAGCTGATCCATCGGGACAATCTCGTG CTGGTCTGACGGCGACATGC
Downstream 100 bases:
>100_bases AAGCGGCGGCGCGCCGCACCCGATCAGCGGATCTGATTGAGCTGCGTCCGGTTGTAGCGGATGTTCTCGATGATTGTCGG ACGCTTGGCCGCCGGCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MPRLGRGGEGDKKARACGLFAFVSLSNLGFMAGLSRACSRMSAIDAHRRARPPVSCI
Sequences:
>Translated_57_residues MPRLGRGGEGDKKARACGLFAFVSLSNLGFMAGLSRACSRMSAIDAHRRARPPVSCI >Mature_56_residues PRLGRGGEGDKKARACGLFAFVSLSNLGFMAGLSRACSRMSAIDAHRRARPPVSCI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6051; Mature: 5920
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLGRGGEGDKKARACGLFAFVSLSNLGFMAGLSRACSRMSAIDAHRRARPPVSCI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PRLGRGGEGDKKARACGLFAFVSLSNLGFMAGLSRACSRMSAIDAHRRARPPVSCI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA