| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813883
Identifier: 237813883
GI number: 237813883
Start: 3533252
End: 3533572
Strand: Reverse
Name: 237813883
Synonym: GBP346_A3661
Alternate gene names: NA
Gene position: 3533572-3533252 (Counterclockwise)
Preceding gene: 237813884
Following gene: 237813882
Centisome position: 86.21
GC content: 71.96
Gene sequence:
>321_bases ATGCGACAAATCCTTCTTCTCATCGTGCTGTTCTTCGCGAGTTCGTGGGTCGCGAGAAAGATTCGTCAGGCGCAGGCGCG CGGCGACGGCCCGTTCGCGGGCGGCGCGGGCCGCACGGCCGATTCCGCTTCCGGCGGGGGGGGCGCGACACAGGCGGGCC GCCCGCGCGACGCCGCATTGCCGGAGCCGATGGTGCGCTGCGCGGAATGCGGCGTGCATGCGCCGAAGAGCGACGCCGTC GTCGCGGGCGGCGAGTATTTCTGCAGTCCGGAGCACGCGGCGCGCCATGCCGCGCATTCGGGCAGCCGCAGCGGGCAATG A
Upstream 100 bases:
>100_bases GTGCTCGCGTCGTTCGTCGCGCTGCTGCTCGCGTACGTCGGCAGCCGCTTCGTTCTCGAGGTGCTGCTGCACCGTTCCGT GGTTTGAACACCTGATCCCG
Downstream 100 bases:
>100_bases GCGAGGCGGGGCGCTTCGCGGTCGGCGCCGACGGCTGGGTCGACGGCGCGCGGCGCGAGCCGTCGCCGAATTTCGAAGCG CGGCCGGACGGCGCAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRQILLLIVLFFASSWVARKIRQAQARGDGPFAGGAGRTADSASGGGGATQAGRPRDAALPEPMVRCAECGVHAPKSDAV VAGGEYFCSPEHAARHAAHSGSRSGQ
Sequences:
>Translated_106_residues MRQILLLIVLFFASSWVARKIRQAQARGDGPFAGGAGRTADSASGGGGATQAGRPRDAALPEPMVRCAECGVHAPKSDAV VAGGEYFCSPEHAARHAAHSGSRSGQ >Mature_106_residues MRQILLLIVLFFASSWVARKIRQAQARGDGPFAGGAGRTADSASGGGGATQAGRPRDAALPEPMVRCAECGVHAPKSDAV VAGGEYFCSPEHAARHAAHSGSRSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10858; Mature: 10858
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQILLLIVLFFASSWVARKIRQAQARGDGPFAGGAGRTADSASGGGGATQAGRPRDAAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPMVRCAECGVHAPKSDAVVAGGEYFCSPEHAARHAAHSGSRSGQ CHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRQILLLIVLFFASSWVARKIRQAQARGDGPFAGGAGRTADSASGGGGATQAGRPRDAAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPMVRCAECGVHAPKSDAVVAGGEYFCSPEHAARHAAHSGSRSGQ CHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA