| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is aroE [H]
Identifier: 237813862
GI number: 237813862
Start: 3512778
End: 3513656
Strand: Reverse
Name: aroE [H]
Synonym: GBP346_A3640
Alternate gene names: 237813862
Gene position: 3513656-3512778 (Counterclockwise)
Preceding gene: 237813863
Following gene: 237813861
Centisome position: 85.73
GC content: 73.04
Gene sequence:
>879_bases ATGAGCACGGCCGTCGAATCGGCAGCGCGCGCGCGCGATCGCTATGCGGTGATCGGCAATCCGATCGCGCACAGCAAATC GCCGTTCATCCATTCGCGTTTCGCCGAGCAGACGGGCGAGGCGATCGAATACACGCATCTGCTCGCGCCGCTCGACGGCT TTTCGGCCACGGTGCGCGCGTTCATCGCGCAGGGCGGCCGCGGCGTGAACGTCACGGTGCCGTTCAAGCTCGAGGCCTAT GCGCTCGCCGATGCGCTGTCGCCGCGCGCGGCGGCGGCGGGCGCGGTCAACACGCTGCGCTTCGACGCGGACGGCGTTTT CGGCGACAACACCGACGGCGTCGGCCTCGTGCGCGACATCGAGGTGAATCTCGGCGTGAGCCTCACGGGCGCGCGGATCC TGCTGCTCGGCGCGGGCGGCGCGGCACGCGGCGTCGTGCTGCCGATGCTCGAGCGCGGGCCCGCGTCGCTCACGATCGTC AACCGGACCGCGAGCAAGGCGGAAGAACTCGTCGGCCAGTTCACGCAGGCGGCGCACGACGCGGGCTGCGTGCTCGCCGG CGGCGGGCCCGAACGGATCGCGCGCGAGCCGTACGACGTGATCGTCAACGCGACGGCGGGCAGCCTCGACGCGGCGCTGC CCGAGTGCGACGCGGCGGCCTTCGGCCCGGCGACGCTCGCGTACGACATGATGTACGGCGCGCGCCCGACCGTGTTCATG GAGCACGCCGCGGCGCTCGGCGCGCGCACGGCGGATGGCCTCGGAATGCTCGTCGAGCAGGCCGCGGAATCGTTCCACGT CTGGCGAGGCGTGCGACCCGACAGCGCGCCCGTGCTCGCCGCGCTGCGCGCCGCGCTCGCGGCGTCGGCCGCGCACTGA
Upstream 100 bases:
>100_bases CCGACGAATCGGCGCAAGGCGAAGCGGAAGCGCTCGCCGAGGCGGGCGGCGCGGCGAGCGGCAACGGCGAATCGTCCGCG AACGGCGAGGAACAATCGAA
Downstream 100 bases:
>100_bases GCGCGGGAGGCGCACGCGGGATGCGCAACAGCCCCGTTTCGCCCGGCCCGGGTTACGCGCCGGCGCGCGGCTCGGAACGC GCGCGCCGGCGCGGCGTCGC
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSTAVESAARARDRYAVIGNPIAHSKSPFIHSRFAEQTGEAIEYTHLLAPLDGFSATVRAFIAQGGRGVNVTVPFKLEAY ALADALSPRAAAAGAVNTLRFDADGVFGDNTDGVGLVRDIEVNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIV NRTASKAEELVGQFTQAAHDAGCVLAGGGPERIAREPYDVIVNATAGSLDAALPECDAAAFGPATLAYDMMYGARPTVFM EHAAALGARTADGLGMLVEQAAESFHVWRGVRPDSAPVLAALRAALAASAAH
Sequences:
>Translated_292_residues MSTAVESAARARDRYAVIGNPIAHSKSPFIHSRFAEQTGEAIEYTHLLAPLDGFSATVRAFIAQGGRGVNVTVPFKLEAY ALADALSPRAAAAGAVNTLRFDADGVFGDNTDGVGLVRDIEVNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIV NRTASKAEELVGQFTQAAHDAGCVLAGGGPERIAREPYDVIVNATAGSLDAALPECDAAAFGPATLAYDMMYGARPTVFM EHAAALGARTADGLGMLVEQAAESFHVWRGVRPDSAPVLAALRAALAASAAH >Mature_291_residues STAVESAARARDRYAVIGNPIAHSKSPFIHSRFAEQTGEAIEYTHLLAPLDGFSATVRAFIAQGGRGVNVTVPFKLEAYA LADALSPRAAAAGAVNTLRFDADGVFGDNTDGVGLVRDIEVNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVN RTASKAEELVGQFTQAAHDAGCVLAGGGPERIAREPYDVIVNATAGSLDAALPECDAAAFGPATLAYDMMYGARPTVFME HAAALGARTADGLGMLVEQAAESFHVWRGVRPDSAPVLAALRAALAASAAH
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789675, Length=278, Percent_Identity=49.6402877697842, Blast_Score=233, Evalue=1e-62, Organism=Escherichia coli, GI1787983, Length=268, Percent_Identity=29.1044776119403, Blast_Score=101, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6320332, Length=163, Percent_Identity=34.3558282208589, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 30004; Mature: 29873
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVESAARARDRYAVIGNPIAHSKSPFIHSRFAEQTGEAIEYTHLLAPLDGFSATVRA CCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH FIAQGGRGVNVTVPFKLEAYALADALSPRAAAAGAVNTLRFDADGVFGDNTDGVGLVRDI HHHCCCCCEEEEECCEEEHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEE EVNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVNRTASKAEELVGQFTQAAHD EEECCEEECCCEEEEEECCCCCCCEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCC AGCVLAGGGPERIAREPYDVIVNATAGSLDAALPECDAAAFGPATLAYDMMYGARPTVFM CCEEEECCCHHHHHCCCCEEEEECCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHH EHAAALGARTADGLGMLVEQAAESFHVWRGVRPDSAPVLAALRAALAASAAH HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure STAVESAARARDRYAVIGNPIAHSKSPFIHSRFAEQTGEAIEYTHLLAPLDGFSATVRA CHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH FIAQGGRGVNVTVPFKLEAYALADALSPRAAAAGAVNTLRFDADGVFGDNTDGVGLVRDI HHHCCCCCEEEEECCEEEHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEE EVNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVNRTASKAEELVGQFTQAAHD EEECCEEECCCEEEEEECCCCCCCEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCC AGCVLAGGGPERIAREPYDVIVNATAGSLDAALPECDAAAFGPATLAYDMMYGARPTVFM CCEEEECCCHHHHHCCCCEEEEECCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHH EHAAALGARTADGLGMLVEQAAESFHVWRGVRPDSAPVLAALRAALAASAAH HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA