| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is gpmB [H]
Identifier: 237813768
GI number: 237813768
Start: 3431494
End: 3432156
Strand: Reverse
Name: gpmB [H]
Synonym: GBP346_A3545
Alternate gene names: 237813768
Gene position: 3432156-3431494 (Counterclockwise)
Preceding gene: 237813769
Following gene: 237813762
Centisome position: 83.74
GC content: 69.38
Gene sequence:
>663_bases ATGCCCACGACGCAGATTCTCTTCATTCGCCATGGCGAGACGGCCTGGAACCGCATCAAGCGGATTCAAGGCCACATCGA CATTCCGCTCGCCGACACGGGGCTGGCGCAGGCGCGGCAACTGGCCGAGCGGCTCGCGCGGGAGGCGCGCGGCGGCGCGC GGATCGACGCGGTTTATACGAGCGATTTGTCGCGTGCGCGGCAGACCGCGCAGCCGACGGCCGATGCGCTCGGCCTGCCG CTCGTGCCTCGGCAGGCGCTTCGCGAACGCGCGTACGGCGTGTTCCAGGGGCACGACAGCACCGAGATCGAGGCGCGCTT TCCCGACGCGTTCGCACAGTGGCAGACGCGCGACCCCGGCTTCGAGCCGGAAGGCGGCGAGTCGCACCGCGCGTTCTATC ATCGCGTGCTGCATGAAGTCGAGCGGATCGTCGCCGCGCATCCGGGCGGGCGCATCGCGTGCGTCGCGCACGGCGGCGTG CTCGACTGCGTGTACCGCTTCGCGAACGATCTGCCGCTCGATGCGCCGCGCAAGCATGCGCTGCTGAATACGAGCGTCAA CGTCGTCGATTATGATGACGGCCGCGCGCGCGTCGTGCGCTGGGCCGACGTCGATCACCTGAGCGGGGCGAGCGACGACG ACGGCTATCGGAAGGTGCTGTGA
Upstream 100 bases:
>100_bases GCCGACATGCAGGTGTCGCTCGTCAACGACGGCCCCGTGACGTTCTGGCTGCAGACGCGCGCCTGATGCGCCCTTGACGC TCCGATTCGAGACCGCACCG
Downstream 100 bases:
>100_bases CGATCGTCGTGCCGCCGCGCGGCCGGTGCGTGCAGAGGCGTGCAGGCGCCGGCCGACGGGCGGGGCATCCTTCGGGGTGG GCGCACGGCGGCCGGCCATA
Product: phosphoglycerate mutase family protein
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPTTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQARQLAERLAREARGGARIDAVYTSDLSRARQTAQPTADALGLP LVPRQALRERAYGVFQGHDSTEIEARFPDAFAQWQTRDPGFEPEGGESHRAFYHRVLHEVERIVAAHPGGRIACVAHGGV LDCVYRFANDLPLDAPRKHALLNTSVNVVDYDDGRARVVRWADVDHLSGASDDDGYRKVL
Sequences:
>Translated_220_residues MPTTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQARQLAERLAREARGGARIDAVYTSDLSRARQTAQPTADALGLP LVPRQALRERAYGVFQGHDSTEIEARFPDAFAQWQTRDPGFEPEGGESHRAFYHRVLHEVERIVAAHPGGRIACVAHGGV LDCVYRFANDLPLDAPRKHALLNTSVNVVDYDDGRARVVRWADVDHLSGASDDDGYRKVL >Mature_219_residues PTTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQARQLAERLAREARGGARIDAVYTSDLSRARQTAQPTADALGLPL VPRQALRERAYGVFQGHDSTEIEARFPDAFAQWQTRDPGFEPEGGESHRAFYHRVLHEVERIVAAHPGGRIACVAHGGVL DCVYRFANDLPLDAPRKHALLNTSVNVVDYDDGRARVVRWADVDHLSGASDDDGYRKVL
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=221, Percent_Identity=35.2941176470588, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1786970, Length=201, Percent_Identity=26.3681592039801, Blast_Score=72, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324857, Length=213, Percent_Identity=31.924882629108, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322306, Length=170, Percent_Identity=31.7647058823529, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24461; Mature: 24329
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQARQLAERLAREARGGARIDAVYT CCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEH SDLSRARQTAQPTADALGLPLVPRQALRERAYGVFQGHDSTEIEARFPDAFAQWQTRDPG HHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHCEEECCCCCCEEEEECCHHHHHCCCCCCC FEPEGGESHRAFYHRVLHEVERIVAAHPGGRIACVAHGGVLDCVYRFANDLPLDAPRKHA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHE LLNTSVNVVDYDDGRARVVRWADVDHLSGASDDDGYRKVL EECCCEEEEEECCCCEEEEEEECCHHCCCCCCCCCHHCCC >Mature Secondary Structure PTTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQARQLAERLAREARGGARIDAVYT CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEH SDLSRARQTAQPTADALGLPLVPRQALRERAYGVFQGHDSTEIEARFPDAFAQWQTRDPG HHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHCEEECCCCCCEEEEECCHHHHHCCCCCCC FEPEGGESHRAFYHRVLHEVERIVAAHPGGRIACVAHGGVLDCVYRFANDLPLDAPRKHA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHE LLNTSVNVVDYDDGRARVVRWADVDHLSGASDDDGYRKVL EECCCEEEEEECCCCEEEEEEECCHHCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA