| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813668
Identifier: 237813668
GI number: 237813668
Start: 3327364
End: 3327765
Strand: Reverse
Name: 237813668
Synonym: GBP346_A3445
Alternate gene names: NA
Gene position: 3327765-3327364 (Counterclockwise)
Preceding gene: 237813669
Following gene: 237813665
Centisome position: 81.19
GC content: 69.4
Gene sequence:
>402_bases ATGACCGAAGACGAACACGCGATCCGCCAACTGATCGAGACCTGGTTTGTCGCGAGCCGGCGCGGCGATCTGACGACCGT GCTGGACCTGATCGCCGACGACGCCATCTTCATGGTTCCCGGCAAACCGCCGTTCGACAAGGCGGCGTTCGCCGCCGCAT CGTGCGACGCACACCCAGCGCGCGCGTCCGACGCCGCGCCGCGCATCGACGGCCGCTACCGGATCGACGAGTTGCGCGTG CTGGGCGACTGGGCGTATCTGCGCAACTTCATCGAGATCGACGTGACGCCGCCCGCCGGCGAACCCGTGCGCCGCGCAGC GCATACGCTCACGATCCTGCGCAAGTCGGAAGGCCGCTGGCGGCTCGTGCGCGACGCGAACCTGCTCGCGTCGGCCGCCT GA
Upstream 100 bases:
>100_bases ATGGGACCAGAGTAAGCGCTAAAGCGCTAACTCTGGTCGACCGCGAAGCATGGGACCAGAGTAAGCGCTAAAGCGCTAAC TCTGGTCGACAGGAACAACG
Downstream 100 bases:
>100_bases CGAACACGCGTCGCGCGTCAAGCCGGCGCGCGGCCGTCGAGCACCCGCTCGAGCGCGTCGACCGCGCGCACGGTCGCGTC CGGCGTGCAGCAGTCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Ketosteroid Isomerase-Like Protein
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTEDEHAIRQLIETWFVASRRGDLTTVLDLIADDAIFMVPGKPPFDKAAFAAASCDAHPARASDAAPRIDGRYRIDELRV LGDWAYLRNFIEIDVTPPAGEPVRRAAHTLTILRKSEGRWRLVRDANLLASAA
Sequences:
>Translated_133_residues MTEDEHAIRQLIETWFVASRRGDLTTVLDLIADDAIFMVPGKPPFDKAAFAAASCDAHPARASDAAPRIDGRYRIDELRV LGDWAYLRNFIEIDVTPPAGEPVRRAAHTLTILRKSEGRWRLVRDANLLASAA >Mature_132_residues TEDEHAIRQLIETWFVASRRGDLTTVLDLIADDAIFMVPGKPPFDKAAFAAASCDAHPARASDAAPRIDGRYRIDELRVL GDWAYLRNFIEIDVTPPAGEPVRRAAHTLTILRKSEGRWRLVRDANLLASAA
Specific function: Unknown
COG id: COG4319
COG function: function code S; Ketosteroid isomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14796; Mature: 14665
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDEHAIRQLIETWFVASRRGDLTTVLDLIADDAIFMVPGKPPFDKAAFAAASCDAHPA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCCC RASDAAPRIDGRYRIDELRVLGDWAYLRNFIEIDVTPPAGEPVRRAAHTLTILRKSEGRW CCCCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHEEECCCCCE RLVRDANLLASAA EEEECCCHHHCCC >Mature Secondary Structure TEDEHAIRQLIETWFVASRRGDLTTVLDLIADDAIFMVPGKPPFDKAAFAAASCDAHPA CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCCC RASDAAPRIDGRYRIDELRVLGDWAYLRNFIEIDVTPPAGEPVRRAAHTLTILRKSEGRW CCCCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHEEECCCCCE RLVRDANLLASAA EEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA