| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is bexA [H]
Identifier: 237813653
GI number: 237813653
Start: 3311691
End: 3312347
Strand: Reverse
Name: bexA [H]
Synonym: GBP346_A3430
Alternate gene names: 237813653
Gene position: 3312347-3311691 (Counterclockwise)
Preceding gene: 237813654
Following gene: 237813652
Centisome position: 80.82
GC content: 50.68
Gene sequence:
>657_bases ATGATTCGACTGACTCGGGTCAAGAAAACGTATCAGACGAAATCCGGAGAGCGTACGGTTCTTGATGGCGTCGACGTTGA TATAGCAAGTGGAGAAAAGATCGGTATTCTCGGCGGGAATGGCGCGGGGAAATCAACGCTGATTCGTATCATAAGCGGCG CCGAGAGGCCGACCGAGGGGCGTGTGTACCGGGGAATGAGCGTCTCGTGGCCCTTGGCATTTGGCGGGGCATTCCAGACT TCGCTCACGGGTATCGACAATCTTCGTTTTATATGCCGAATTTATGATGTATCGGTTGAGGACAAGCTTCCGTTTGTGCG TGAATTCACCGAGCTTGGCAGATACCTCAACGAACCGGTCAAAACATATTCGGCGGGGATGCGGGCCAAGCTTGCCTTTG CCATTTCGATGGCAGTGGATTTCGATTGTTTCCTCATCGATGAAGTCACGGCTGTCGGGGATGAGCGTTTCCGTCAAAAA TGTCATGTGGAATTGTTCGAGAAGCGTAATTCCAGGGCAATGATTTTTGTTTCTCACGATCCGGGATTTATTCGCGCTAA CTGTCAGCGAGCGACGGTTTTGCATGGGGGGAAGTTGTATGAATTTCCGGAAATGGACGAGGCGTATCATTTTTATCGGG AAATGCAGCGCGTATAA
Upstream 100 bases:
>100_bases CGGCACATTATGATATCGGATATATGGCGTGCGCTTGCCTGGCGATGTCTCTGGTCGGTCTCGCGCTGGTTCGCGACGTG GGTCGTGAGGTCACGCCAGA
Downstream 100 bases:
>100_bases GGCGGCAGATCTGCTGGCCAAGAAGGGTCGCAATGAAGAATAAAGTGCGTGTATTGGTTGAACTTCGACCGGCGCTGGAC GGGTATTCTGGCATTCCGCA
Product: Wzt2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIRLTRVKKTYQTKSGERTVLDGVDVDIASGEKIGILGGNGAGKSTLIRIISGAERPTEGRVYRGMSVSWPLAFGGAFQT SLTGIDNLRFICRIYDVSVEDKLPFVREFTELGRYLNEPVKTYSAGMRAKLAFAISMAVDFDCFLIDEVTAVGDERFRQK CHVELFEKRNSRAMIFVSHDPGFIRANCQRATVLHGGKLYEFPEMDEAYHFYREMQRV
Sequences:
>Translated_218_residues MIRLTRVKKTYQTKSGERTVLDGVDVDIASGEKIGILGGNGAGKSTLIRIISGAERPTEGRVYRGMSVSWPLAFGGAFQT SLTGIDNLRFICRIYDVSVEDKLPFVREFTELGRYLNEPVKTYSAGMRAKLAFAISMAVDFDCFLIDEVTAVGDERFRQK CHVELFEKRNSRAMIFVSHDPGFIRANCQRATVLHGGKLYEFPEMDEAYHFYREMQRV >Mature_218_residues MIRLTRVKKTYQTKSGERTVLDGVDVDIASGEKIGILGGNGAGKSTLIRIISGAERPTEGRVYRGMSVSWPLAFGGAFQT SLTGIDNLRFICRIYDVSVEDKLPFVREFTELGRYLNEPVKTYSAGMRAKLAFAISMAVDFDCFLIDEVTAVGDERFRQK CHVELFEKRNSRAMIFVSHDPGFIRANCQRATVLHGGKLYEFPEMDEAYHFYREMQRV
Specific function: Putative ATP-binding protein, and an energy-coupling component of capsule polysaccharide export apparatus [H]
COG id: COG1134
COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27477115, Length=204, Percent_Identity=30.3921568627451, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI27436953, Length=218, Percent_Identity=30.2752293577982, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI47078218, Length=218, Percent_Identity=28.4403669724771, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI45446740, Length=218, Percent_Identity=28.4403669724771, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI153792144, Length=216, Percent_Identity=30.5555555555556, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1789751, Length=205, Percent_Identity=27.8048780487805, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1790467, Length=225, Percent_Identity=27.5555555555556, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1788761, Length=227, Percent_Identity=25.5506607929515, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI87082267, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1789891, Length=240, Percent_Identity=24.1666666666667, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=28.3783783783784, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787712, Length=201, Percent_Identity=25.8706467661692, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI2367384, Length=195, Percent_Identity=29.7435897435897, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007184, Length=184, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI221500365, Length=181, Percent_Identity=29.8342541436464, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24643672, Length=213, Percent_Identity=23.0046948356808, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24657; Mature: 24657
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLTRVKKTYQTKSGERTVLDGVDVDIASGEKIGILGGNGAGKSTLIRIISGAERPTEG CEEEHHHHHHHHCCCCCEEEECCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC RVYRGMSVSWPLAFGGAFQTSLTGIDNLRFICRIYDVSVEDKLPFVREFTELGRYLNEPV CEEECCEECCCEEECCCHHHHHCCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH KTYSAGMRAKLAFAISMAVDFDCFLIDEVTAVGDERFRQKCHVELFEKRNSRAMIFVSHD HHHHCCCCEEEEEEEEEEECCCEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECC PGFIRANCQRATVLHGGKLYEFPEMDEAYHFYREMQRV CCEEEECCCEEEEEECCEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIRLTRVKKTYQTKSGERTVLDGVDVDIASGEKIGILGGNGAGKSTLIRIISGAERPTEG CEEEHHHHHHHHCCCCCEEEECCCCEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC RVYRGMSVSWPLAFGGAFQTSLTGIDNLRFICRIYDVSVEDKLPFVREFTELGRYLNEPV CEEECCEECCCEEECCCHHHHHCCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH KTYSAGMRAKLAFAISMAVDFDCFLIDEVTAVGDERFRQKCHVELFEKRNSRAMIFVSHD HHHHCCCCEEEEEEEEEEECCCEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECC PGFIRANCQRATVLHGGKLYEFPEMDEAYHFYREMQRV CCEEEECCCEEEEEECCEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3284653; 2082145 [H]