| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813651
Identifier: 237813651
GI number: 237813651
Start: 3308790
End: 3310040
Strand: Reverse
Name: 237813651
Synonym: GBP346_A3427
Alternate gene names: NA
Gene position: 3310040-3308790 (Counterclockwise)
Preceding gene: 237813652
Following gene: 237813649
Centisome position: 80.76
GC content: 55.72
Gene sequence:
>1251_bases GTGTTCCATCACATTCCCAAGACGGCGGGATCGTCGTTCAATCAGATACTTCGCACGCTATATCGCGACGACGAAGTATG CGACGCTGCGTTGGATGACGAACTCGATGAAGTGATGGCCGACGAGACGCGTCGTTACGAGCTGTTTGTCGGGCATTTCA GCTTCGACGCGCTGCATCGGCACTTCGGCGGTGCCACGCGTTTGACTTTTCTTCGCGATCCGGTTCAGCGCTGTATTTCC CAGTATCACAACTGGCATGACGCCTCGCGCTATTCGGATGCGTGGATCGGGCGCAGCGACACGAATCCGGACGTCATCAA GGCGTTGAAGATGACGTCCGAGATGTCGCTTGGTGAATTTGTGAGTTCGGACAATCTCGTGATTTCCGACAGCGCTCAAA ACATGATGACTCGCTACCTCGCGCCGAGCGTCGAATGGAAGAAGGAGCGTGGATACTATGACGCCGAGCTTGTCGAGAAA GCCAAGCGCAATCTCGTCGAGTATTTTCATTTTTTTGGCCTGACCGAGCAATTTGATCGTTCACTAGTGCTTCTTGCGCA TACCCTCGGTATCCGCCCATGGGAACGGAGCGATGCACTGCTAACTAATCGAAATCCGAAGAAGGCTTCGTTCGACAGTG TTTACAATACCACGCCAGAAGAAGGCGGTGTTTTACGCGATTACAACTTGATGGATATCGAGTTGTACGAGTTCGCGGTA AAGGAATTCAATCGCCGCTTCGACGCGGGATACCAGAAGCTTGTCGAGTGCGCCTTTGAGTATCTCGCTGACAAGGACAC TCGCGACATGGGTAATGCTGGCGATTTTTACGCGTTCGACATGACGAACGCAGTCGGCGCCCGAGGTTTGCATTTTCTGG AATCCACCCGGTTGCCGTGCGGTGCGGATGTTCTTGGACGTTGGACAGGGCTGGAGCCGCGAGCTGTATGGGAGATTCCG CTTCGCGCGGGGCGCGACAGCCATGTCGTGATCGAAGTGGACTATATCGATAGCGTGTCGCAGGAGGCCCTGGCGCCGGA GCATTTCACGTTAAACGGCATGCCGGCCAGGCAGCATGCGTTCAGCGCGGAGGGCTCGATCCAGCGTCTGCGCCTGGTCT TTTCCGCCGGCGCCGCGCTTGCCGGCAGAATGTTGCACACGCTGAAATTGACTACTCCGCTTGTGCGTGCGGAAGACGGA ACGCGCGACGTTGGAGTGCTTCTATTGCGCTTGCAGTCTTACAGCGTTTAG
Upstream 100 bases:
>100_bases CCTTGAGGTTCGAAGAGGTAAACAGCACATGCGTGAGCGCACAGTTGACTATTCGTTTTGCGGCATGGTGCGCAGTCGGG AGCGGCTGGCGCGCCAAATT
Downstream 100 bases:
>100_bases GTAAAAGAAATGATAAAAATTGTGATAGACCAGGATGTTGACGGCTCCGGAGCGGTGGCTTCTTATTTGGCCGGCCGCAT CAACGCCAGCGGGCGCCGGG
Product: WcbF
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MFHHIPKTAGSSFNQILRTLYRDDEVCDAALDDELDEVMADETRRYELFVGHFSFDALHRHFGGATRLTFLRDPVQRCIS QYHNWHDASRYSDAWIGRSDTNPDVIKALKMTSEMSLGEFVSSDNLVISDSAQNMMTRYLAPSVEWKKERGYYDAELVEK AKRNLVEYFHFFGLTEQFDRSLVLLAHTLGIRPWERSDALLTNRNPKKASFDSVYNTTPEEGGVLRDYNLMDIELYEFAV KEFNRRFDAGYQKLVECAFEYLADKDTRDMGNAGDFYAFDMTNAVGARGLHFLESTRLPCGADVLGRWTGLEPRAVWEIP LRAGRDSHVVIEVDYIDSVSQEALAPEHFTLNGMPARQHAFSAEGSIQRLRLVFSAGAALAGRMLHTLKLTTPLVRAEDG TRDVGVLLLRLQSYSV
Sequences:
>Translated_416_residues MFHHIPKTAGSSFNQILRTLYRDDEVCDAALDDELDEVMADETRRYELFVGHFSFDALHRHFGGATRLTFLRDPVQRCIS QYHNWHDASRYSDAWIGRSDTNPDVIKALKMTSEMSLGEFVSSDNLVISDSAQNMMTRYLAPSVEWKKERGYYDAELVEK AKRNLVEYFHFFGLTEQFDRSLVLLAHTLGIRPWERSDALLTNRNPKKASFDSVYNTTPEEGGVLRDYNLMDIELYEFAV KEFNRRFDAGYQKLVECAFEYLADKDTRDMGNAGDFYAFDMTNAVGARGLHFLESTRLPCGADVLGRWTGLEPRAVWEIP LRAGRDSHVVIEVDYIDSVSQEALAPEHFTLNGMPARQHAFSAEGSIQRLRLVFSAGAALAGRMLHTLKLTTPLVRAEDG TRDVGVLLLRLQSYSV >Mature_416_residues MFHHIPKTAGSSFNQILRTLYRDDEVCDAALDDELDEVMADETRRYELFVGHFSFDALHRHFGGATRLTFLRDPVQRCIS QYHNWHDASRYSDAWIGRSDTNPDVIKALKMTSEMSLGEFVSSDNLVISDSAQNMMTRYLAPSVEWKKERGYYDAELVEK AKRNLVEYFHFFGLTEQFDRSLVLLAHTLGIRPWERSDALLTNRNPKKASFDSVYNTTPEEGGVLRDYNLMDIELYEFAV KEFNRRFDAGYQKLVECAFEYLADKDTRDMGNAGDFYAFDMTNAVGARGLHFLESTRLPCGADVLGRWTGLEPRAVWEIP LRAGRDSHVVIEVDYIDSVSQEALAPEHFTLNGMPARQHAFSAEGSIQRLRLVFSAGAALAGRMLHTLKLTTPLVRAEDG TRDVGVLLLRLQSYSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47383; Mature: 47383
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHHIPKTAGSSFNQILRTLYRDDEVCDAALDDELDEVMADETRRYELFVGHFSFDALHR CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHH HFGGATRLTFLRDPVQRCISQYHNWHDASRYSDAWIGRSDTNPDVIKALKMTSEMSLGEF HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VSSDNLVISDSAQNMMTRYLAPSVEWKKERGYYDAELVEKAKRNLVEYFHFFGLTEQFDR HCCCCEEEECCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCC SLVLLAHTLGIRPWERSDALLTNRNPKKASFDSVYNTTPEEGGVLRDYNLMDIELYEFAV HHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCEEECCCCEEHHHHHHHH KEFNRRFDAGYQKLVECAFEYLADKDTRDMGNAGDFYAFDMTNAVGARGLHFLESTRLPC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC GADVLGRWTGLEPRAVWEIPLRAGRDSHVVIEVDYIDSVSQEALAPEHFTLNGMPARQHA CHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEECCCCHHHHH FSAEGSIQRLRLVFSAGAALAGRMLHTLKLTTPLVRAEDGTRDVGVLLLRLQSYSV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFHHIPKTAGSSFNQILRTLYRDDEVCDAALDDELDEVMADETRRYELFVGHFSFDALHR CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHH HFGGATRLTFLRDPVQRCISQYHNWHDASRYSDAWIGRSDTNPDVIKALKMTSEMSLGEF HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VSSDNLVISDSAQNMMTRYLAPSVEWKKERGYYDAELVEKAKRNLVEYFHFFGLTEQFDR HCCCCEEEECCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCC SLVLLAHTLGIRPWERSDALLTNRNPKKASFDSVYNTTPEEGGVLRDYNLMDIELYEFAV HHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCEEECCCCEEHHHHHHHH KEFNRRFDAGYQKLVECAFEYLADKDTRDMGNAGDFYAFDMTNAVGARGLHFLESTRLPC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC GADVLGRWTGLEPRAVWEIPLRAGRDSHVVIEVDYIDSVSQEALAPEHFTLNGMPARQHA CHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEECCCCHHHHH FSAEGSIQRLRLVFSAGAALAGRMLHTLKLTTPLVRAEDGTRDVGVLLLRLQSYSV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA