| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813633
Identifier: 237813633
GI number: 237813633
Start: 3285403
End: 3285804
Strand: Reverse
Name: 237813633
Synonym: GBP346_A3409
Alternate gene names: NA
Gene position: 3285804-3285403 (Counterclockwise)
Preceding gene: 237813634
Following gene: 237813629
Centisome position: 80.17
GC content: 68.41
Gene sequence:
>402_bases GTGGCGTATCGGTCCGGCGTCGTCATCGATTTTCGCAGCGCGCCGGGTGAGCGGCAGGCCGCCGATCGAGAGGCCGCGCC TGCGCAATCGTGGCCGCGTGTCATCCGCAAGCGGCCGCGCCCACGGTCGCCCGTCGTGCCGATCGCAAGCGTGCATTTCG CCACATCATCGGCATGGCCGGGTGCATTCATATTGCCGCGGAGCCGATCGACGCGCGCATCGGCGAATGCGTTCCATACG ACCGTCGTCGCATCGCGGCGCATACCCACCGATACGAAGCTCGCGCCGCTTCGCGTCGGGATCGGCATGCGCCGGCCCTA TCGCGTTCAGTCGTCTTTCCTTTGCCGCTCCACCGTCAATCGGGCTTGGCCCCGTCGCGCTTGTCCGCCGCCGCGTGCCT GA
Upstream 100 bases:
>100_bases GCCGGATGTGCGCTTCACGCGCTGAACCGGCGAGCTCGACGCCGCGGCGTGCGACCGACGGCTGACAGATGGTGCGGCCT GCATCGCGCCGTGTTGCTTC
Downstream 100 bases:
>100_bases AATCGCGTACCCGCACGAACGTCACATAGTTCGAATCGTGCTGGCTGTGCGCGCCGCCTTCGCCGTCGTCGAACGCCATA CGCACGACCGCGACGATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAYRSGVVIDFRSAPGERQAADREAAPAQSWPRVIRKRPRPRSPVVPIASVHFATSSAWPGAFILPRSRSTRASANAFHT TVVASRRIPTDTKLAPLRVGIGMRRPYRVQSSFLCRSTVNRAWPRRACPPPRA
Sequences:
>Translated_133_residues MAYRSGVVIDFRSAPGERQAADREAAPAQSWPRVIRKRPRPRSPVVPIASVHFATSSAWPGAFILPRSRSTRASANAFHT TVVASRRIPTDTKLAPLRVGIGMRRPYRVQSSFLCRSTVNRAWPRRACPPPRA >Mature_132_residues AYRSGVVIDFRSAPGERQAADREAAPAQSWPRVIRKRPRPRSPVVPIASVHFATSSAWPGAFILPRSRSTRASANAFHTT VVASRRIPTDTKLAPLRVGIGMRRPYRVQSSFLCRSTVNRAWPRRACPPPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14785; Mature: 14654
Theoretical pI: Translated: 12.62; Mature: 12.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRSGVVIDFRSAPGERQAADREAAPAQSWPRVIRKRPRPRSPVVPIASVHFATSSAWP CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC GAFILPRSRSTRASANAFHTTVVASRRIPTDTKLAPLRVGIGMRRPYRVQSSFLCRSTVN CEEEEECCCCCCCCCCHHHHHEEECCCCCCCCCCCEEEECCCCCCCEECHHHHHHHHHHH RAWPRRACPPPRA HCCCCCCCCCCCC >Mature Secondary Structure AYRSGVVIDFRSAPGERQAADREAAPAQSWPRVIRKRPRPRSPVVPIASVHFATSSAWP CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC GAFILPRSRSTRASANAFHTTVVASRRIPTDTKLAPLRVGIGMRRPYRVQSSFLCRSTVN CEEEEECCCCCCCCCCHHHHHEEECCCCCCCCCCCEEEECCCCCCCEECHHHHHHHHHHH RAWPRRACPPPRA HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA