| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813631
Identifier: 237813631
GI number: 237813631
Start: 3282877
End: 3284235
Strand: Direct
Name: 237813631
Synonym: GBP346_A3408
Alternate gene names: NA
Gene position: 3282877-3284235 (Clockwise)
Preceding gene: 237813630
Following gene: 237813632
Centisome position: 80.1
GC content: 67.03
Gene sequence:
>1359_bases ATGCATTCGGCGGGAATGCATACGGCCGCGCCCGCATGCGGCGGCGGCAGCGCACCGATCCGCCGCCGCGCGGGCGCCTG CGCGTACGGCGCGCAGCGTTCGAGCACGCCGCCCGGCCATGCGCGGCCGACGAACCATGGAGTCTTCATGCGACGCGTGA GCGTTCCCACCCTGCTCTTCGCCGCCAGCGCCTGCTTCTTCTCGCTGAACGCGTTCAGCGTGCGCGCGACCTTCGCCGCC TATGCCCTGCTCGCGCTCCTCGCGCTGTTGCGCGCGCCGACGCTGTTCGCACGCCAGCAACGCTTGCCCGCGATCGTCGC GTACTGGCTGCTGAGCGTGAGCAGCGCATTCCTCGTATCGGCGTTCGGTGATTTCTACGCGAACTTCTTCGTCAAGTTCG TGCTGATCCAGACCTACGTCGCACTCGCGTTCTGGCTGTTCGCGAGCGGCGTGCTGGCGATGCGCTCGCTCGAACGGACC TGCGAAACGCTGATCTACGTGCACGCGACGTTCTTCATCGTGCAGCTCGGCTGCTACCTCGCCTTCGGCCACTTCATCGA TTTCGACAGCTACATCCGCGAGAGCGATTCGGAAGCGCTCTATGCGACGAAGGCGCTGAGCGACAGCCTCATCTCGATCC GCGCGCTCGGCCTCTATTCGGAACCGTCGTTCTACGCGATGACGGTCGTGCCCGCGGGCGCCATCCTGCTGCTCGCGAAG CGACGCATGACGGCCGCGACGATCGTCGCGTTCGCAACCGCGCTGCTGTCGTTCTCGATCGCGGCGATCCTGATCTGCGC GCTGCTCGGCGGCGTGCACTTTTTCGCGGGACGCACGTCGATCCGGATCAAGCTCGTGATCGCCGCGGTCGCGCTCGCGA TCGCGCCGGCGATGTACGGCGTGTACGACAAGCGCGTGAATCAGTCCGCCGACTACGACGCGCTCGGCAGCCGCACGCTC GTGCTGCGCGAGTTGCGCGAGCGCGACGCACTGGCCGACGTGTTCGGCAGCGGCCTCTTCTGGGACGAGCGCAACAACGT CGGCAAGACGCACTTGCGCGGCTACCAGGTGCGCGACAGCTCGTTCTACGTGTATCTGCTGTTCGCAACCGGCGTAGCCG GCGCGACCGCGTTCGTCGGCGCTTTGTTCATGCTATTCCGGCGGCGCGGCCGCCGAAGCCTGCTGCCGTACCTGCTGCCG CTTCTCCTCTTCAAGTTTCACGCGCTATACGGCATGCTATGGCTCACGCTGCTGATGTTCGTCGTCGTCGCCGGGCACGC CGAGCGCCTGCCCGAGCGCCGTGAACGGCCTGGTACCGGTACCGGCCGGTTGAGCGCGACCAGCGCATCGGGCCCCTAG
Upstream 100 bases:
>100_bases GCACCGAGCCGCATCGGCACGCGGCGCGCGCTGACCGCCCCCGCTGACGGCGCGCGGCCCGCATCGCCCCCGCCGGAACG CCGCGCGGCGCGCGCAAGCG
Downstream 100 bases:
>100_bases CGTTTGGCCGCGCATGCGCCGACACGCAAAGGAGGATGTCGATGACAACCCGCTGGATGCTGGCTTGCCTGTTCTGCGCG TGCGTCGTGGCATCGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MHSAGMHTAAPACGGGSAPIRRRAGACAYGAQRSSTPPGHARPTNHGVFMRRVSVPTLLFAASACFFSLNAFSVRATFAA YALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVSAFGDFYANFFVKFVLIQTYVALAFWLFASGVLAMRSLERT CETLIYVHATFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDSLISIRALGLYSEPSFYAMTVVPAGAILLLAK RRMTAATIVAFATALLSFSIAAILICALLGGVHFFAGRTSIRIKLVIAAVALAIAPAMYGVYDKRVNQSADYDALGSRTL VLRELRERDALADVFGSGLFWDERNNVGKTHLRGYQVRDSSFYVYLLFATGVAGATAFVGALFMLFRRRGRRSLLPYLLP LLLFKFHALYGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATSASGP
Sequences:
>Translated_452_residues MHSAGMHTAAPACGGGSAPIRRRAGACAYGAQRSSTPPGHARPTNHGVFMRRVSVPTLLFAASACFFSLNAFSVRATFAA YALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVSAFGDFYANFFVKFVLIQTYVALAFWLFASGVLAMRSLERT CETLIYVHATFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDSLISIRALGLYSEPSFYAMTVVPAGAILLLAK RRMTAATIVAFATALLSFSIAAILICALLGGVHFFAGRTSIRIKLVIAAVALAIAPAMYGVYDKRVNQSADYDALGSRTL VLRELRERDALADVFGSGLFWDERNNVGKTHLRGYQVRDSSFYVYLLFATGVAGATAFVGALFMLFRRRGRRSLLPYLLP LLLFKFHALYGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATSASGP >Mature_452_residues MHSAGMHTAAPACGGGSAPIRRRAGACAYGAQRSSTPPGHARPTNHGVFMRRVSVPTLLFAASACFFSLNAFSVRATFAA YALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVSAFGDFYANFFVKFVLIQTYVALAFWLFASGVLAMRSLERT CETLIYVHATFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDSLISIRALGLYSEPSFYAMTVVPAGAILLLAK RRMTAATIVAFATALLSFSIAAILICALLGGVHFFAGRTSIRIKLVIAAVALAIAPAMYGVYDKRVNQSADYDALGSRTL VLRELRERDALADVFGSGLFWDERNNVGKTHLRGYQVRDSSFYVYLLFATGVAGATAFVGALFMLFRRRGRRSLLPYLLP LLLFKFHALYGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATSASGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49301; Mature: 49301
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSAGMHTAAPACGGGSAPIRRRAGACAYGAQRSSTPPGHARPTNHGVFMRRVSVPTLLF CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH AASACFFSLNAFSVRATFAAYALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AFGDFYANFFVKFVLIQTYVALAFWLFASGVLAMRSLERTCETLIYVHATFFIVQLGCYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGHFIDFDSYIRESDSEALYATKALSDSLISIRALGLYSEPSFYAMTVVPAGAILLLAK HHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH RRMTAATIVAFATALLSFSIAAILICALLGGVHFFAGRTSIRIKLVIAAVALAIAPAMYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VYDKRVNQSADYDALGSRTLVLRELRERDALADVFGSGLFWDERNNVGKTHLRGYQVRDS HHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCEEEECC SFYVYLLFATGVAGATAFVGALFMLFRRRGRRSLLPYLLPLLLFKFHALYGMLWLTLLMF CEEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVAGHAERLPERRERPGTGTGRLSATSASGP HHHHCHHHHCHHHHCCCCCCCCCEECCCCCCC >Mature Secondary Structure MHSAGMHTAAPACGGGSAPIRRRAGACAYGAQRSSTPPGHARPTNHGVFMRRVSVPTLLF CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH AASACFFSLNAFSVRATFAAYALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AFGDFYANFFVKFVLIQTYVALAFWLFASGVLAMRSLERTCETLIYVHATFFIVQLGCYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGHFIDFDSYIRESDSEALYATKALSDSLISIRALGLYSEPSFYAMTVVPAGAILLLAK HHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH RRMTAATIVAFATALLSFSIAAILICALLGGVHFFAGRTSIRIKLVIAAVALAIAPAMYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VYDKRVNQSADYDALGSRTLVLRELRERDALADVFGSGLFWDERNNVGKTHLRGYQVRDS HHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCEEEECC SFYVYLLFATGVAGATAFVGALFMLFRRRGRRSLLPYLLPLLLFKFHALYGMLWLTLLMF CEEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVAGHAERLPERRERPGTGTGRLSATSASGP HHHHCHHHHCHHHHCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA