| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813627
Identifier: 237813627
GI number: 237813627
Start: 3281281
End: 3281430
Strand: Direct
Name: 237813627
Synonym: GBP346_A3404
Alternate gene names: NA
Gene position: 3281281-3281430 (Clockwise)
Preceding gene: 237813625
Following gene: 237813628
Centisome position: 80.06
GC content: 50.67
Gene sequence:
>150_bases GTGTGCTCCCATCCGACCAATGTTGAACGCGCATTCCATGCCGCCGGCCCTTTCACTCATTCAGCAATGTCTATTCTGCG GCGCATCATATTCCTTCAAATCGTTGCAACAATCTTTCTGTCCGATTACGACGCCATGTTGGCGGATTGA
Upstream 100 bases:
>100_bases CCGCCATGCGCCCGGCCTGCATCAACGAAAAGCCTCCAAACAAGACAACAGCGATCCCTTTTCGGTAGCACACGCCTCCG AAAGCTGCACCACGACTCAC
Downstream 100 bases:
>100_bases AGCTGGACATCGATTCCAGCATTTATCCGATGCACCAATTCCAATTGGTGCGTGCATTGCACCAAAAAGCACGCGTGAAC TTGTCGAATTCGGACAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MCSHPTNVERAFHAAGPFTHSAMSILRRIIFLQIVATIFLSDYDAMLAD
Sequences:
>Translated_49_residues MCSHPTNVERAFHAAGPFTHSAMSILRRIIFLQIVATIFLSDYDAMLAD >Mature_49_residues MCSHPTNVERAFHAAGPFTHSAMSILRRIIFLQIVATIFLSDYDAMLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5480; Mature: 5480
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSHPTNVERAFHAAGPFTHSAMSILRRIIFLQIVATIFLSDYDAMLAD CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCSHPTNVERAFHAAGPFTHSAMSILRRIIFLQIVATIFLSDYDAMLAD CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA