Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813619

Identifier: 237813619

GI number: 237813619

Start: 3272429

End: 3273625

Strand: Reverse

Name: 237813619

Synonym: GBP346_A3396

Alternate gene names: NA

Gene position: 3273625-3272429 (Counterclockwise)

Preceding gene: 237813620

Following gene: 237813618

Centisome position: 79.87

GC content: 65.91

Gene sequence:

>1197_bases
ATGATTGTCGTCGTCGTCGATTCGATGGAGCGGTACTACTTTGCCGTGCGGCTCGTGAAGGCGGTCAGAAAGGAATTCGA
CTTTCTGTTCGCCGCGAGCGAGCCGCTCGCGCACCTGATGGCACTGGCCGCGGGCTTTCGGTCGGTCTATTTGCGGCGCG
GGGCGCATGCGCCCGCCATGCTCGATGCGGCGGCCGGGATTCGGTCCGATGCATCGATCGAGGTGCTGAACGGACAGATG
ACGCCCGAGCGCGCGCGCGCCGACGCGCAGGCGGTCTTCGCCGCGATGTCCGGCGTGTTCCGCCGTCATCTCGTGTCGCA
GTGCCTGATGTGGAACGGCCAGCAGCTCGTTTGCCACGCGGTCGCGCACGCGTGCGCGGCGCACGGGGTACCGACGAAAT
TCGTCGAGATCTCGAATTTGCCGGACAAGCTGTTCGTCGATCGGCTCGGCGTCAACGCGCTGTCGTCGATCAGCCGCAAT
CCGGCCGTCATCGACGGCTTGCCGATGCCGACCGAAGGCGAGCATCGCCGCTGGTTCGCGCGCTACGAGGCGTACAAGGC
GCGGCCGCTGCCGCAGTCGCGCACGTCGTGGGCGCGCAAGGCGATGTCGGCCGCGAACCATGCGCTGAAGCTCGCCACGC
AAGGCGTGGCGCGCAAACGTTTGGACGCGGCGCGCGCGACGAACGGCGCGCGCGCGCCGGCGCAGGCGAAAGTGCTGAGC
ACGAAGGAACTCTCGGCGCTGCGCTACGTGTTCCTGCCGCTGCAGGTGTCGGGCGACACGCAGATCAAGCTGCATTCGGA
TGTCGACAACCTGAAGGCGATCCGGCTCGCGTTCGAGCACGCGGCGAACGAGAACGCGGACCTGATCGTCAAGCTGCATC
CGGCCGAGCGTGACGTGGCCGTGATCGACGAGGTGGTGCGGATGCAGCGCGTCTATCACTTCGACCTCGTGACGTCGCCG
ACCACCGATCTGATCAAGCACGCGCATTCGGTCGTCACGATCAATTCGACGGTCGGCCTCGAGGCGCTGCTGTACGGCAA
GCCGGTCGTGTCGCTCGGCCGGTGCTTCTACAAGGAGTTCGATCGCGCGAGGCTGCTCAAGTACATCCATGCGTTCCTGA
TCGACGGCATCGATTACTTCGGTCGAGCGGACATCGCGCCGCGCGCCGCGCGAAACGTGTTCTCGATGAAGCACTGA

Upstream 100 bases:

>100_bases
TCGCCGGCATCGCGCTGACATTCAGCGTGATGAGCGGCAGCGTGTCGCGTCGGCGCGCCGGCGCCTGACGTTTATTCCAT
TTCTTCATTGAGCGCAGATC

Downstream 100 bases:

>100_bases
CATGCGCACGACGCTGAAACGGACCTTCGATGCGATCGCCGAGGATCGCAGGCGCAACGCGTTCTTCAAGACGCGCTGCG
TCGTCGTGTTCTTCCGGATC

Product: capsule polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Capsule Polysaccharide Biosynthesis; Capsule Polysaccharide Protein HcsB

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAMLDAAAGIRSDASIEVLNGQM
TPERARADAQAVFAAMSGVFRRHLVSQCLMWNGQQLVCHAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRN
PAVIDGLPMPTEGEHRRWFARYEAYKARPLPQSRTSWARKAMSAANHALKLATQGVARKRLDAARATNGARAPAQAKVLS
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVAVIDEVVRMQRVYHFDLVTSP
TTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEFDRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH

Sequences:

>Translated_398_residues
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAMLDAAAGIRSDASIEVLNGQM
TPERARADAQAVFAAMSGVFRRHLVSQCLMWNGQQLVCHAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRN
PAVIDGLPMPTEGEHRRWFARYEAYKARPLPQSRTSWARKAMSAANHALKLATQGVARKRLDAARATNGARAPAQAKVLS
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVAVIDEVVRMQRVYHFDLVTSP
TTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEFDRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH
>Mature_398_residues
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAMLDAAAGIRSDASIEVLNGQM
TPERARADAQAVFAAMSGVFRRHLVSQCLMWNGQQLVCHAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRN
PAVIDGLPMPTEGEHRRWFARYEAYKARPLPQSRTSWARKAMSAANHALKLATQGVARKRLDAARATNGARAPAQAKVLS
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVAVIDEVVRMQRVYHFDLVTSP
TTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEFDRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH

Specific function: Unknown

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44076; Mature: 44076

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAM
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LDAAAGIRSDASIEVLNGQMTPERARADAQAVFAAMSGVFRRHLVSQCLMWNGQQLVCHA
HHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRNPAVIDGLPMPTEGEHRRWFA
HHHHHHHCCCCCEEEEECCCCHHHHHHHHCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH
RYEAYKARPLPQSRTSWARKAMSAANHALKLATQGVARKRLDAARATNGARAPAQAKVLS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVA
HHHHHHEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
VIDEVVRMQRVYHFDLVTSPTTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEF
HHHHHHHHHHHHHHEECCCCHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHH
DRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAM
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LDAAAGIRSDASIEVLNGQMTPERARADAQAVFAAMSGVFRRHLVSQCLMWNGQQLVCHA
HHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRNPAVIDGLPMPTEGEHRRWFA
HHHHHHHCCCCCEEEEECCCCHHHHHHHHCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH
RYEAYKARPLPQSRTSWARKAMSAANHALKLATQGVARKRLDAARATNGARAPAQAKVLS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVA
HHHHHHEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
VIDEVVRMQRVYHFDLVTSPTTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEF
HHHHHHHHHHHHHHEECCCCHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHH
DRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA