| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is btuC [C]
Identifier: 237813556
GI number: 237813556
Start: 3215051
End: 3216166
Strand: Reverse
Name: btuC [C]
Synonym: GBP346_A3332
Alternate gene names: 237813556
Gene position: 3216166-3215051 (Counterclockwise)
Preceding gene: 237813557
Following gene: 237813552
Centisome position: 78.47
GC content: 74.64
Gene sequence:
>1116_bases ATGAGCGGCGCGGCACCCGCCGACGCACCGCCGGCATCGCGCGGCCGTCGATGGCGCGTGCGGCTCGTGCTGCCCGCGCT TGCGGCGCTCGTCGCGATTTCGATCGTCGCGTCGACCGCGCTCGGCGCGACGACGATCGCGCCGGCGCGGGTCGTCGCGA TCGTGTTGTCGCATCTCGCGGACCTGCGCGTCATGAATGCGCACGTCGCCCACGCGCACGTCGCCCACGCGCATGTCGCC GACACGCTCGCCCGGAGCGGCGCATCGTTCGCCGAAGACAGCATCGTCTGGCAGATCAGATTGCCGCGCGCGCTGCTCGC GGCGCTCGTCGGCGCGACGCTCGCGATGGTCGGCGTCGCGCTGCAGGCGGCGACCGCGAACCGGCTCGCCGATCCGCACC TGCTCGGCGTGAGTTCGGGCGCGATGCTCGGCGCGGTGGCGGCGACGCTCGGCCTCGGCGCCGCGTTCGGACCGTTCACG CTGTCGTTCGCGGCGTTCGCGGGCGCGCTCGCCGCCACCGCGCTCGTGATCGCGCTCGCGTACCGGCGCGGCCGGCTCGA GCCGGAGCGCTTGCTGCTCGCGGGCGTCGCGGTGTCGTTCATGATGACCGCGCTCGCGAACCTGCTGCTGTATCTCGGCG ATCCGCGCGCCGCGTCGTCGGTGCTGTTCTGGATGCTCGGCGGCGTCGGGCTCGCGCGCTGGGATCTGCTTGCCGCGCCC GCATGCTGCGCGGCGTTCGCGGCGCTGCTGCTCTTCGCGCGCCGGCGCGAGCTGAACGCGCTGATGTCGGGTGACGTCGC GGCGGTGTCGCTCGGCGTGCCGGTTGCGCGGATGCGTCGCGAAGTGTTCGTGATCGCGTCGTTCGCGACGGGCGCGATGG TCGCGGTGAGCGGCGCGATCGGCTTCGTCGGGCTCGTGACGCCGCATCTGTGCCGGCGGCTCGTCGGCGCGGAGCACGCC CGGCTGTTGCCGGTCGCCGGGTTGAGCGGCGCGGCGCTGCTCGTGTGGGCCGACGTCGCCGCGCGCACGCTCGCCGCGCC GGAGGATCTGCCGATCGGCATCGTGACCGCGGGGCTCGGCGGCGCGTTCTTCGTCGCGCTGATGCGGCGGCGGTGA
Upstream 100 bases:
>100_bases TGATTCCGTACGATGCGGCGACGCCCGGCGTCGAGAACGCGGCGGCCGTCGAGACGATCGCGCGCGGCCTGCATCCGCGC GCGTTCGCGAAGGCCGCGCG
Downstream 100 bases:
>100_bases ACGCCGGCGCGCCGGCTTCGCACGGCGAATCGAGGCGTCGCGCGCGGCATGGCGCGGTTGCGCGCCGCGTTCGCCGGCTC GCTCAGCGCCGCTTGCCGCG
Product: iron chelate uptake ABC transporter, FeCT family, permease protein
Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSGAAPADAPPASRGRRWRVRLVLPALAALVAISIVASTALGATTIAPARVVAIVLSHLADLRVMNAHVAHAHVAHAHVA DTLARSGASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFT LSFAAFAGALAATALVIALAYRRGRLEPERLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAP ACCAAFAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGLVTPHLCRRLVGAEHA RLLPVAGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFVALMRRR
Sequences:
>Translated_371_residues MSGAAPADAPPASRGRRWRVRLVLPALAALVAISIVASTALGATTIAPARVVAIVLSHLADLRVMNAHVAHAHVAHAHVA DTLARSGASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFT LSFAAFAGALAATALVIALAYRRGRLEPERLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAP ACCAAFAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGLVTPHLCRRLVGAEHA RLLPVAGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFVALMRRR >Mature_370_residues SGAAPADAPPASRGRRWRVRLVLPALAALVAISIVASTALGATTIAPARVVAIVLSHLADLRVMNAHVAHAHVAHAHVAD TLARSGASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTL SFAAFAGALAATALVIALAYRRGRLEPERLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAPA CCAAFAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGLVTPHLCRRLVGAEHAR LLPVAGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFVALMRRR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788004, Length=281, Percent_Identity=40.5693950177936, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1790741, Length=285, Percent_Identity=37.1929824561403, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1790740, Length=275, Percent_Identity=39.6363636363636, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1786805, Length=288, Percent_Identity=36.8055555555556, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1786347, Length=290, Percent_Identity=33.1034482758621, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1786804, Length=276, Percent_Identity=33.695652173913, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37871; Mature: 37740
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAAPADAPPASRGRRWRVRLVLPALAALVAISIVASTALGATTIAPARVVAIVLSHLA CCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DLRVMNAHVAHAHVAHAHVADTLARSGASFAEDSIVWQIRLPRALLAALVGATLAMVGVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH LQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTLSFAAFAGALAATALVIALA HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YRRGRLEPERLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH ACCAAFAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAI HHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHEEEEEEHHCCHHHHHHHHH GFVGLVTPHLCRRLVGAEHARLLPVAGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLG HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCH GAFFVALMRRR HHHHHHHHHCC >Mature Secondary Structure SGAAPADAPPASRGRRWRVRLVLPALAALVAISIVASTALGATTIAPARVVAIVLSHLA CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DLRVMNAHVAHAHVAHAHVADTLARSGASFAEDSIVWQIRLPRALLAALVGATLAMVGVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH LQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTLSFAAFAGALAATALVIALA HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YRRGRLEPERLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH ACCAAFAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAI HHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHEEEEEEHHCCHHHHHHHHH GFVGLVTPHLCRRLVGAEHARLLPVAGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLG HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCH GAFFVALMRRR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]
Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]