| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813554
Identifier: 237813554
GI number: 237813554
Start: 3213309
End: 3213947
Strand: Direct
Name: 237813554
Synonym: GBP346_A3330
Alternate gene names: NA
Gene position: 3213309-3213947 (Clockwise)
Preceding gene: 237813553
Following gene: 237813555
Centisome position: 78.4
GC content: 67.76
Gene sequence:
>639_bases ATGACCGTCGGCCTCGACGCCTCCCAGCCGATATGGTTCTACGACTTCCTGTCGCCGTTCTCGTATCTGCTGCTGGAGCA ACACGACAAATGGCCCGGCATCGCGTTCGCGCTCGCGCCGGTGGCGCTCGCCGACCTGCATCGCCATTGGGGCCAGCGCT ACGCGTACGGCGTGCCCGCCAAGCGCGTGTTCACCTACCGGCACGCGCTCTTTCGCGCCGAACAGCTCGGCATTCCGTTC AGGATGCCGCCCGCGCATCCGTTCGATTCGACGCGCGCGCTGCTGCTCGCGATCGCGCTCGATTCGGACGTCCAGGCGAT CCGCGAGATCTTCCGCTTCATCTGGCGCGAGGGGCGCGACCCGTCGGCGCCCGACAATTTCGCCGAGCTGTGCGGGCGCG TGGGCATCGCGCACGACGACGACCGGCTCACGTCGGACGAAACGCTCGCGCAGTTGCGCCGCAACACCGACGACGCGATC AGCCTGGGCGTATTCGGCGTGCCGACGTTCTGGCTGAACCGCCAGCTGTTCTGGGGCGAGGACGCGCTGCCGATGGTGCT CTATTGCGCGCGCACGCCGAGTTGGCTCGAATCGAGCGAAGTCAGGCGCATCAGCACGCTGCCGTCGGGCCTCGCATGA
Upstream 100 bases:
>100_bases TGAGCCGAAAATCCGTCGCGGCGGCTGCATTTGCCCGCGCCGCCGCGTAACATTCAACAAAGAGGCCGCGCGTTGCGTCC TATTCCTCAGGAGACTCTCC
Downstream 100 bases:
>100_bases TGCCGCCCGCCGCGCCGCATCGCGGGCGCGCGGCGCGCGAGGCGCGCGCCTGACGCCGCCCCGCCCGCAGCAGATGCAAC CGGATCAGGATCGCGCCGCC
Product: dsba oxidoreductase
Products: NA
Alternate protein names: Isomerase; Dsba Oxidoreductase; 2-Hydroxychromene-2-Carboxylate Isomerase; Thioredoxin Domain Protein; DSBA-Like Thioredoxin Domain Protein; Thioredoxin Oxidoreductase
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTVGLDASQPIWFYDFLSPFSYLLLEQHDKWPGIAFALAPVALADLHRHWGQRYAYGVPAKRVFTYRHALFRAEQLGIPF RMPPAHPFDSTRALLLAIALDSDVQAIREIFRFIWREGRDPSAPDNFAELCGRVGIAHDDDRLTSDETLAQLRRNTDDAI SLGVFGVPTFWLNRQLFWGEDALPMVLYCARTPSWLESSEVRRISTLPSGLA
Sequences:
>Translated_212_residues MTVGLDASQPIWFYDFLSPFSYLLLEQHDKWPGIAFALAPVALADLHRHWGQRYAYGVPAKRVFTYRHALFRAEQLGIPF RMPPAHPFDSTRALLLAIALDSDVQAIREIFRFIWREGRDPSAPDNFAELCGRVGIAHDDDRLTSDETLAQLRRNTDDAI SLGVFGVPTFWLNRQLFWGEDALPMVLYCARTPSWLESSEVRRISTLPSGLA >Mature_211_residues TVGLDASQPIWFYDFLSPFSYLLLEQHDKWPGIAFALAPVALADLHRHWGQRYAYGVPAKRVFTYRHALFRAEQLGIPFR MPPAHPFDSTRALLLAIALDSDVQAIREIFRFIWREGRDPSAPDNFAELCGRVGIAHDDDRLTSDETLAQLRRNTDDAIS LGVFGVPTFWLNRQLFWGEDALPMVLYCARTPSWLESSEVRRISTLPSGLA
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24134; Mature: 24003
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGLDASQPIWFYDFLSPFSYLLLEQHDKWPGIAFALAPVALADLHRHWGQRYAYGVPA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCH KRVFTYRHALFRAEQLGIPFRMPPAHPFDSTRALLLAIALDSDVQAIREIFRFIWREGRD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC PSAPDNFAELCGRVGIAHDDDRLTSDETLAQLRRNTDDAISLGVFGVPTFWLNRQLFWGE CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHCCEEEECC DALPMVLYCARTPSWLESSEVRRISTLPSGLA CCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVGLDASQPIWFYDFLSPFSYLLLEQHDKWPGIAFALAPVALADLHRHWGQRYAYGVPA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCH KRVFTYRHALFRAEQLGIPFRMPPAHPFDSTRALLLAIALDSDVQAIREIFRFIWREGRD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC PSAPDNFAELCGRVGIAHDDDRLTSDETLAQLRRNTDDAISLGVFGVPTFWLNRQLFWGE CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHCCEEEECC DALPMVLYCARTPSWLESSEVRRISTLPSGLA CCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA