| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is ttr [H]
Identifier: 237813541
GI number: 237813541
Start: 3200001
End: 3200528
Strand: Direct
Name: ttr [H]
Synonym: GBP346_A3317
Alternate gene names: 237813541
Gene position: 3200001-3200528 (Clockwise)
Preceding gene: 237813540
Following gene: 237813542
Centisome position: 78.08
GC content: 71.78
Gene sequence:
>528_bases ATGAGCCATGCGATCGGCGTGCGACGCATCGGGCCCGACGAAGCGGCCGCATGCGTCGACGCACTGTCCGACGTGCTGAT CGATTGCGTCGAAGGCGGCGCGTCGGTGAGCTTCATGGCGCCGCTCGCGCGGGACAAGGCGCGCGCGTTCTGGCGCGAGG CCGCCGAAGGCGTCGCGCGCGGCGAGCGCACGCTCTTCGTCGCCGAAGACGCCGACGGCCGCATCGTCGGCACCGTCCAG ATGATCACGCGGCAGCCCGAAAACCAGCCGCATCGCGCGGACGTCGCGAAGATGCTCGTGCATCGTGACGCACGCCGCCG CGGCGTCGCGCAACGGTTGCTCGCCGCGCTCGACGACGCCGCGCGCGCGGCCGGCAAGACCGTCCTCGTGCTCGACACCG TGACGGGCGGCGACACCGAGCGGCTCTACGCGCGCGCGGGATGGCAGCGCGTCGGTGTCGTGCCCGATTACGCGCTGATG CCCGACGGCGCGCCGTGCGCGACGACGTTCTTCTACAAGCAGATCTGA
Upstream 100 bases:
>100_bases GTCTCGATCGCCCCGCCGTCTTCTTCAACCCGGGCCGCAAGGCCGCGCGCTATGTCGTCGCGCTCGCCGCGGCGAACGCC GTTCGTCCCGGGTGGATCGA
Downstream 100 bases:
>100_bases ACGGCCGAGCCCGCTTTCCCGGCATTGCCGGCGTTGCCGCGGTTTCGCTCCGCCCGCCTTGCGCCGCACGCGCGACGTCG CGCCAATCGGCGGCCTCGCG
Product: acetyltransferase, gnat family
Products: NA
Alternate protein names: Tabtoxin resistance protein [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSHAIGVRRIGPDEAAACVDALSDVLIDCVEGGASVSFMAPLARDKARAFWREAAEGVARGERTLFVAEDADGRIVGTVQ MITRQPENQPHRADVAKMLVHRDARRRGVAQRLLAALDDAARAAGKTVLVLDTVTGGDTERLYARAGWQRVGVVPDYALM PDGAPCATTFFYKQI
Sequences:
>Translated_175_residues MSHAIGVRRIGPDEAAACVDALSDVLIDCVEGGASVSFMAPLARDKARAFWREAAEGVARGERTLFVAEDADGRIVGTVQ MITRQPENQPHRADVAKMLVHRDARRRGVAQRLLAALDDAARAAGKTVLVLDTVTGGDTERLYARAGWQRVGVVPDYALM PDGAPCATTFFYKQI >Mature_174_residues SHAIGVRRIGPDEAAACVDALSDVLIDCVEGGASVSFMAPLARDKARAFWREAAEGVARGERTLFVAEDADGRIVGTVQM ITRQPENQPHRADVAKMLVHRDARRRGVAQRLLAALDDAARAAGKTVLVLDTVTGGDTERLYARAGWQRVGVVPDYALMP DGAPCATTFFYKQI
Specific function: Renders tabtoxin-producing pathogens tolerant to their own phytotoxins [H]
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 18863; Mature: 18732
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAIGVRRIGPDEAAACVDALSDVLIDCVEGGASVSFMAPLARDKARAFWREAAEGVAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHC GERTLFVAEDADGRIVGTVQMITRQPENQPHRADVAKMLVHRDARRRGVAQRLLAALDDA CCEEEEEEECCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAGKTVLVLDTVTGGDTERLYARAGWQRVGVVPDYALMPDGAPCATTFFYKQI HHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SHAIGVRRIGPDEAAACVDALSDVLIDCVEGGASVSFMAPLARDKARAFWREAAEGVAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHC GERTLFVAEDADGRIVGTVQMITRQPENQPHRADVAKMLVHRDARRRGVAQRLLAALDDA CCEEEEEEECCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAGKTVLVLDTVTGGDTERLYARAGWQRVGVVPDYALMPDGAPCATTFFYKQI HHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2336364 [H]