| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813530
Identifier: 237813530
GI number: 237813530
Start: 3190585
End: 3191607
Strand: Reverse
Name: 237813530
Synonym: GBP346_A3306
Alternate gene names: NA
Gene position: 3191607-3190585 (Counterclockwise)
Preceding gene: 237813533
Following gene: 237813528
Centisome position: 77.87
GC content: 70.77
Gene sequence:
>1023_bases ATGCCTGACAAACATAATCATCGCGCCGACGCCGAAGGCCTGTCGCTCGGCAGCTTGCGCACGGCAGCATGGCTTCGGTA TCTCCTCGATCACGCGGAGCGTTTCGCCGCCGCGGCGGCGTCAAGCCGCGAAGCGCGCGTTGCGGCCGCCGCGCGCGACA CGCTCGCGAAGGCGGGCGCGCACGCGCGGCGCGAACCGGCCGCCGATGCGGGTCTCCTCCTGAACGAACTGCTCGCGGCG CTGGAAGGCGACGGCGCATCCGTCGACGAGGCGCGCGGCAACGCATATGGCGAACTCGCGCGCACGCCGCCCAAACGGCT GCTTGCCGCCGTCGACCGTTACCTGCCCGGTTCGAAGGCCGTGTTTGACGGCGCGCATGGCGTTGCCGACGTACTTGGCT ATGACGATGCCGAACTCGGCTGGGCCGCGCTCGATTCGATCGAGCTTGGCATCGGGCGCGCGCTCGCGAGCGACGGCAAA GCCGCGGACGATGCGATGCGCGGCATCGCCGCCTTCGAAGGGCCGGCGGCGGGGCGGGTGATCGACCATGCGATCGGGCG CATGTGGGGCGCGGACGAAAAGCGCGCCGACGCGTTGAGCGCGCTGGCGGCATTTTCGGCCACGCTTGCGATGAATGCGC CGATCACGCTCGACGCCTACGGCGGCGAGCACAACGGCGTCGCCGCCGCGATTCTTCGCGAGCGCGGGGATCTCGCCTCG GCGCCGGGGCTGCTCGCCGCGCTCGCCGTTTGCAGGCTCGACCGTCTGACGGGCGCGGGCAGCTTCTGGGCGTATTACCT GCTAGCGGGCGTGATGATCGCGGCGCCGCAGGCCGTGGCATCGATCGCCGCGCGGTTTCACCGCGACGCGCTGAGCGCTT GGCTCGACATGCTGCTCGCCGTGCCCGCGCGCAGCCCGATCGGCGACGCCGGCGAGGCCGCATTGGCGCGATTGGCCGCG TCGATGAGCTTCACGTCGCGGCACAATCCGATCGTTCACACGAGGCACAGGTCGATGGGCTGA
Upstream 100 bases:
>100_bases CCTTCGATGCATGGGCGAGGCCGCTCGCGCGCGGCGTGCAGCGACAGTGGCCGTCGCCCGAGTGCGGACACGATCCGCAT CGCTATTTCTCGGATGACCC
Downstream 100 bases:
>100_bases GCGGCGGCCGGCGCAAGCCGCGCTCAGATCGACAGGCAGATCTTGCCGAAGTGCTTGCCGGCCGCTTGATGGGCGAACGC GTCGGCGATGTCGTCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPDKHNHRADAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAA LEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGRALASDGK AADDAMRGIAAFEGPAAGRVIDHAIGRMWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAA SMSFTSRHNPIVHTRHRSMG
Sequences:
>Translated_340_residues MPDKHNHRADAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAA LEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGRALASDGK AADDAMRGIAAFEGPAAGRVIDHAIGRMWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAA SMSFTSRHNPIVHTRHRSMG >Mature_339_residues PDKHNHRADAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAAL EGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGRALASDGKA ADDAMRGIAAFEGPAAGRVIDHAIGRMWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLASA PGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAAS MSFTSRHNPIVHTRHRSMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35235; Mature: 35104
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKHNHRADAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC HARREPAADAGLLLNELLAALEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKA HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCH VFDGAHGVADVLGYDDAELGWAALDSIELGIGRALASDGKAADDAMRGIAAFEGPAAGRV HHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH IDHAIGRMWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCC APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPARSPIGDAGEAALARLAASMSFTSRHNPIVHTRHRSMG HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure PDKHNHRADAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC HARREPAADAGLLLNELLAALEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKA HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCH VFDGAHGVADVLGYDDAELGWAALDSIELGIGRALASDGKAADDAMRGIAAFEGPAAGRV HHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH IDHAIGRMWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCC APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPARSPIGDAGEAALARLAASMSFTSRHNPIVHTRHRSMG HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA