| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813523
Identifier: 237813523
GI number: 237813523
Start: 3185655
End: 3187814
Strand: Reverse
Name: 237813523
Synonym: GBP346_A3299
Alternate gene names: NA
Gene position: 3187814-3185655 (Counterclockwise)
Preceding gene: 237813525
Following gene: 237813522
Centisome position: 77.78
GC content: 68.29
Gene sequence:
>2160_bases ATGAAACAAAACTTCAAGTTGACGAGCATTGCATTGTCCGCAGCGGTTGCGTTCGGAGTCGCGGCTGCGACGCCGGCCGT CGCAGCCGGATTGGATACGCTTCCGGTTTCCGCTTCGGTGACTGACCTCGGCGGCGCCGGGGCGGGGAGCGCCATGCTGG CGCTCGCCGGCGGGGCGCAACATGGCTCGATCCATGCGAGCGCGCTCGGTTCGGCCGACGCATCGATCAGCAACGTCGCA CTCGACAACTTGACGGGTACGCTTGCGAACGCGGCGAGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGTGT CGCGAGCAATGCAGTCGGTACGCTGACGAATCTGGCGAACAACAATCCGTTGCCGGGTGCGCTGAGCAATGCGGTGAGCA CGCTGCAGAACGCGGCGACGAACAACCCGCTGTCGGGCGTCGCGAGCAACGCGGTCGGCACGCTGACGAATCTGGCGAAC AACAATCCGCTGCCGGGTGCGCTGAGCAATGCGGTGAGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGCGT CGCGAGCAATGCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAATGCGGTGAGCA CGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGTGTCGCGAACAACGCGGTCGGCACGCTGACGAATCTGGCGAAC AGCAATCCGCTGCCGGGTGCGCTGAGCAATGCGGCGAGCACGCTGCAGAACGCGGCGACGAACAACCCGCTGTCGGGCGT CGCGAGCAACGCGGTCGGCACGCTGACGAATCTGGCGAACAGCAATCCGCTGCCGGGTGCGCTGAGCAATGCGGTGAGCA CGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGCGTCGCGAGCAATGCAGTCGGCACGCTGACGAATCTGGCGAAC AACAATCCGCTGCCCGGCGCACTGAGCAATGCGGTGGGCACGCTGCAAAACGCGGCGACGAACAACCCGCTGTCGGGCGT CGCGAGCAATGCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAATGCGGTGAGCA CGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGTGTCGCGAACAACGCGGTCGGCACGCTGACGAATCTGGCGAAC AACAATCCGCTGCCCGGCGCACTGAGCAATGCGGTGAGCACGCTGCAAAACGCGGCGACGAACAACCCGCTGTCGGGTGT CGCGAGCAATGCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAACGTGGCTGGCG CATTGGCCGGCGCCGCGAGCAATGGCTCGGGAGCACTGACGGGCGCCGCCGGCAACGTGACGGGCGCGCTCGCCGGCGCG GGCAGCACCGCGGCCGGCGCGATCTCGGGGGCGATGAGCAACAACCCGTTGCCGGGCGTCGTGAACAACGTGGTCGGCAC GCTCGCGAACGCGATCGGCAGCAATCCGATCACGCCCATCACGAGCGTCGCGAGCGGTCTCGCGAACGCGCTTTCCGTTG CCAATCCCGCCGCGCTGACCGCGGCCGCAAACACCGTCGCGGGCACGCTCGCGCGCGCGGCGAACGGCACCCCGGTCGCG GGTGCGATCGGCGGCCTCGTGGCCGCGCTGCCCGTCGCTAATCCGGCCGGCGCGCTGACGAGCGCGGCAAACAACGCAGC AAGCACGATCGCGACGGTGGCGGGCACCAACCCGGCTGCCGCGATCGGCGGCGTCGCGGGCGCATTGACGGGGGCGGCCG GCACCGGCGTGGCGACGGCCTCGCAACTCGGAAGCGTCGGCTCGGCGCTGATGGGTTCGGGCGCGGCCTCGGCTGGCAAG GTTTTGACGTCGGGCAGCGCCGCATTCGGCAGCGCGGCCGCGTCGGCCGGCTCGCTGCTGACGACGGGAGCGGCCGCCGC GAGCTCGGTCGTCAATTCGCTGGGCTCGTCGGTCGGCGCAGTGGTGGCGTCGCTGCCGAACCTGAGCGTGTCGTCGTCGA AGTCGACGGCTGCGGCGTCGAATCCGCTGGCACCCGTCTCGTCGACGGTCGCGACGCTCGTCGGCGCGCTGCCGAAGTAA
Upstream 100 bases:
>100_bases AGAAAACGGTGCGCGATCGATCGGGTGCGCGTGCTGGCATGTTCCGTGCGGAGACCTCGGCGCCGTAACGACGGCGGTAC CCATCCACACGAGGTCACTT
Downstream 100 bases:
>100_bases TGGCGCGGCGCGTTTCGGTCGGATAGCGGAACGCGCCCCTGGTGGAGAGTAGTCAGCCGGAAGGCGAAGCGGGGCGGCAT GGCGGTGACGTCATGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVA LDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLAN NNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN NNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVA GAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGK VLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK
Sequences:
>Translated_719_residues MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVA LDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLAN NNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN NNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVA GAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGK VLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK >Mature_719_residues MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVA LDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLAN NNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN NNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVA GAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGK VLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66263; Mature: 66263
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50176 ARM_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGAGSAMLALAGGAQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEECCCC HGSIHASALGSADASISNVALDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLAN CCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAA CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC NNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANNNPLPGALSNAVSTLQNAAT CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCC GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALT CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH AAANTVAGTLARAANGTPVAGAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH AIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGKVLTSGSAAFGSAAASAGSLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHCCHHH TTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGAGSAMLALAGGAQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEECCCC HGSIHASALGSADASISNVALDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLAN CCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAA CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC NNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANNNPLPGALSNAVSTLQNAAT CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCC GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALT CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH AAANTVAGTLARAANGTPVAGAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH AIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGKVLTSGSAAFGSAAASAGSLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHCCHHH TTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA