| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813401
Identifier: 237813401
GI number: 237813401
Start: 3070636
End: 3070908
Strand: Direct
Name: 237813401
Synonym: GBP346_A3175
Alternate gene names: NA
Gene position: 3070636-3070908 (Clockwise)
Preceding gene: 237813400
Following gene: 237813403
Centisome position: 74.92
GC content: 56.41
Gene sequence:
>273_bases ATGGCGATAAGCGTCAAAAACAGCGCATCGAACACGGTTGAAGTGTCGATCAATCACTGGGGAACGGACGGAGACACCAA GCCGTTCAAGATGGCGCCCGGAGCCAGCGATTCCTGGGATCGCAACGACCTACGTGGCTTCGTCATGTATGTGCAGCTGG GCGGGTCGGCGACGCCGTACTATGTGCTGAGCACCAGTAATATCGTGATCTACGACGACAAGGTGACGGATAGCGGGCAA ACGCTCCTTCCCGCAAACAAGCGTTTTGGCTGA
Upstream 100 bases:
>100_bases CCCGCGCATTTCGATTGACCCAATCCTTTAACGAATTTCAGAAAGAGAAATTTCGTTATGGGAATCCGGCTAAAACAGAC TGATAGACCGAGGTGAAATC
Downstream 100 bases:
>100_bases GCGCGCGACAAGAAACCGGGCACATTGGCCTCTGAGCGGCACCAGGGCGCCGATTGGCGCGGCGCGCGGAACAAGCCGAG CGCATCATCGACGTTGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAISVKNSASNTVEVSINHWGTDGDTKPFKMAPGASDSWDRNDLRGFVMYVQLGGSATPYYVLSTSNIVIYDDKVTDSGQ TLLPANKRFG
Sequences:
>Translated_90_residues MAISVKNSASNTVEVSINHWGTDGDTKPFKMAPGASDSWDRNDLRGFVMYVQLGGSATPYYVLSTSNIVIYDDKVTDSGQ TLLPANKRFG >Mature_89_residues AISVKNSASNTVEVSINHWGTDGDTKPFKMAPGASDSWDRNDLRGFVMYVQLGGSATPYYVLSTSNIVIYDDKVTDSGQT LLPANKRFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9777; Mature: 9646
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISVKNSASNTVEVSINHWGTDGDTKPFKMAPGASDSWDRNDLRGFVMYVQLGGSATPY CEEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCE YVLSTSNIVIYDDKVTDSGQTLLPANKRFG EEEECCCEEEEECCCCCCCCEEECCCCCCC >Mature Secondary Structure AISVKNSASNTVEVSINHWGTDGDTKPFKMAPGASDSWDRNDLRGFVMYVQLGGSATPY EEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCE YVLSTSNIVIYDDKVTDSGQTLLPANKRFG EEEECCCEEEEECCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA