Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is yhjE [H]

Identifier: 237813391

GI number: 237813391

Start: 3061841

End: 3063154

Strand: Direct

Name: yhjE [H]

Synonym: GBP346_A3165

Alternate gene names: 237813391

Gene position: 3061841-3063154 (Clockwise)

Preceding gene: 237813389

Following gene: 237813392

Centisome position: 74.7

GC content: 69.56

Gene sequence:

>1314_bases
ATGTCGGACACCCGTCTTTCCGCTTCCGCCGCCGCGCCGCGCGCCGCGAACACGACGAACCACCGTCGCATCGTGTTCGC
GAGCTTCATCGGCACGGCGATCGAGTTCTACGATTTCTACGTGTACGCGACAGCCGCCGCGCTCGTGATCGGCCCCGTGT
TCTTCCCGCACGGCTCGGCCACCGCGCAGGCGCTGTCCGCGTTCGTCACGTTCGGCATCGCGTTCATCGCGCGGCCGATC
GGCTCGTTCCTGTTCGGCCACTTCGGCGACCGGATCGGCCGCAAGTCGACGCTCGTCGCGTCACTGCTCGTGATGGGCGT
GTCGACGACCGCGATCGGCTTCGTGCCCGGCTACGACGCGATCGGCGCGCTCGCGCCCGTGCTGCTCTGCGTGCTGCGGT
TCGGCCAGGGCATCGGCCTCGGCGGCGAATGGGGCGGCGCCGCGCTCCTCGCCACCGAGCACGCGCCCGCCGGCAAGCGC
GGCTGGTTCGGGATGTTTCCGCAGCTCGGCCCGTCGATCGGCTTTCTCGCGTCGAACGGCCTGTTCTTCGCGCTTGCGCT
CACGCTGTCCGACGAGCAGTTTCGTTCGTGGGGCTGGCGCATCCCGTTTCTCGTGAGCGCGGCGCTCGTCGCGGTCGGCC
TCTACGTACGCCTGAAGATCGCCGAAACGCCCGCGTTCCAGGCCGCGCTCGACCGGCACGAGCGCGTGCGCGTACCGCTC
GCGGCGCTCGTTGCGCACCACTGGCGGCCGACGCTGCTCGGCGCGCTCGCGATGGTCGTCTGCTATACGCTGTTCTATAT
CTCGACGGTGTTCTCGCTGTCGTACGGCGTCTCGACGCTGCATTTCTCGCGCCAGAGCTTCCTCGGCCTGCTGTGTTTCG
CGGTGCTGTTCATGGCGCTCGCGACGCCGCTCGCCGCCGCGGCCGCCGATCGCTTCGGTCGCAAGCCGGTGCTGATCGCG
GGCGCGATCGCCGCGCTGCTGTCCGGCTTCACGATGGCGCCGCTGCTCGGCAGCGGCTCGATGCCGCTCGTCGCGCTGTT
CCTGACGATCGAGCTGTTCCTGATGGGCATGACGTTCGCGCCGATGGGCGCGCTGCTGCCGGAACTGTTCCCGACCAACG
TGCGCTACACGGGCGCGGGGGTCGCGTACAACCTGGGCGGCATCCTGGGCGCGTCGATCGCGCCTTACATCGCGCAGTTG
CTTGCCGCGCGCGGCGGACTTGCGTGGGTCGGCGCATACGTGTCGGCCGCGGCGGCGATCAGCCTCGTCGGCGTGCTGCT
GATGCGCGAAACGCGCGATGCGAAGCTGACATAA

Upstream 100 bases:

>100_bases
CCCGACTCTCGATTCGAACAAAGGCGCAACGGCCGCCGAGCGCGCGCGACAAGCGACGCGCGCTCGAGCGGACGCCGTGC
CGCCACAACCGGAGCCCCCC

Downstream 100 bases:

>100_bases
GCCGCACCGGCGCCCCCGCCGCTCGAGCCAGCGGACGGCGGCTCGCCGGCGCGCGCGGAACGAGCGGCGACCGGCAACGT
TTTCGGCACGCACCGCCCTG

Product: MFS transporter, metabolite:H+ symporter (MHS) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSDTRLSASAAAPRAANTTNHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSATAQALSAFVTFGIAFIARPI
GSFLFGHFGDRIGRKSTLVASLLVMGVSTTAIGFVPGYDAIGALAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPAGKR
GWFGMFPQLGPSIGFLASNGLFFALALTLSDEQFRSWGWRIPFLVSAALVAVGLYVRLKIAETPAFQAALDRHERVRVPL
AALVAHHWRPTLLGALAMVVCYTLFYISTVFSLSYGVSTLHFSRQSFLGLLCFAVLFMALATPLAAAAADRFGRKPVLIA
GAIAALLSGFTMAPLLGSGSMPLVALFLTIELFLMGMTFAPMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQL
LAARGGLAWVGAYVSAAAAISLVGVLLMRETRDAKLT

Sequences:

>Translated_437_residues
MSDTRLSASAAAPRAANTTNHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSATAQALSAFVTFGIAFIARPI
GSFLFGHFGDRIGRKSTLVASLLVMGVSTTAIGFVPGYDAIGALAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPAGKR
GWFGMFPQLGPSIGFLASNGLFFALALTLSDEQFRSWGWRIPFLVSAALVAVGLYVRLKIAETPAFQAALDRHERVRVPL
AALVAHHWRPTLLGALAMVVCYTLFYISTVFSLSYGVSTLHFSRQSFLGLLCFAVLFMALATPLAAAAADRFGRKPVLIA
GAIAALLSGFTMAPLLGSGSMPLVALFLTIELFLMGMTFAPMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQL
LAARGGLAWVGAYVSAAAAISLVGVLLMRETRDAKLT
>Mature_436_residues
SDTRLSASAAAPRAANTTNHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSATAQALSAFVTFGIAFIARPIG
SFLFGHFGDRIGRKSTLVASLLVMGVSTTAIGFVPGYDAIGALAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPAGKRG
WFGMFPQLGPSIGFLASNGLFFALALTLSDEQFRSWGWRIPFLVSAALVAVGLYVRLKIAETPAFQAALDRHERVRVPLA
ALVAHHWRPTLLGALAMVVCYTLFYISTVFSLSYGVSTLHFSRQSFLGLLCFAVLFMALATPLAAAAADRFGRKPVLIAG
AIAALLSGFTMAPLLGSGSMPLVALFLTIELFLMGMTFAPMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLL
AARGGLAWVGAYVSAAAAISLVGVLLMRETRDAKLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789941, Length=423, Percent_Identity=53.4278959810875, Blast_Score=382, Evalue=1e-107,
Organism=Escherichia coli, GI1788292, Length=438, Percent_Identity=35.8447488584475, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI1790550, Length=427, Percent_Identity=30.6791569086651, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1788942, Length=442, Percent_Identity=30.7692307692308, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI87082404, Length=406, Percent_Identity=23.3990147783251, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87082231, Length=438, Percent_Identity=23.2876712328767, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 45928; Mature: 45796

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTRLSASAAAPRAANTTNHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSA
CCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAQALSAFVTFGIAFIARPIGSFLFGHFGDRIGRKSTLVASLLVMGVSTTAIGFVPGYDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCHHH
IGALAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPAGKRGWFGMFPQLGPSIGFLASNG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCCHHCCCC
LFFALALTLSDEQFRSWGWRIPFLVSAALVAVGLYVRLKIAETPAFQAALDRHERVRVPL
EEEEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHH
AALVAHHWRPTLLGALAMVVCYTLFYISTVFSLSYGVSTLHFSRQSFLGLLCFAVLFMAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ATPLAAAAADRFGRKPVLIAGAIAALLSGFTMAPLLGSGSMPLVALFLTIELFLMGMTFA
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
PMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLLAARGGLAWVGAYVSAAAAI
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SLVGVLLMRETRDAKLT
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDTRLSASAAAPRAANTTNHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSA
CCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAQALSAFVTFGIAFIARPIGSFLFGHFGDRIGRKSTLVASLLVMGVSTTAIGFVPGYDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCHHH
IGALAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPAGKRGWFGMFPQLGPSIGFLASNG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCCHHCCCC
LFFALALTLSDEQFRSWGWRIPFLVSAALVAVGLYVRLKIAETPAFQAALDRHERVRVPL
EEEEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHH
AALVAHHWRPTLLGALAMVVCYTLFYISTVFSLSYGVSTLHFSRQSFLGLLCFAVLFMAL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ATPLAAAAADRFGRKPVLIAGAIAALLSGFTMAPLLGSGSMPLVALFLTIELFLMGMTFA
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
PMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLLAARGGLAWVGAYVSAAAAI
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SLVGVLLMRETRDAKLT
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]