| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is ymgE [C]
Identifier: 237813364
GI number: 237813364
Start: 3040077
End: 3040328
Strand: Direct
Name: ymgE [C]
Synonym: GBP346_A3135
Alternate gene names: 237813364
Gene position: 3040077-3040328 (Clockwise)
Preceding gene: 237813362
Following gene: 237813368
Centisome position: 74.17
GC content: 64.29
Gene sequence:
>252_bases ATGGCTCATGGCTTGATTATGTGGCTCATCATCGGCGCAATCGCCGGCTGGCTCGCCGGCCTGCTCGTGAAGGGCGGCGG CTTCGGGCTGCTCGTGGACATCATCGTCGGCATCGTCGGCGCCGTCATCGGCGGCTGGCTCGCCGGCATCCTCGGCATTC ACATCGGCGGCGGCTTCATCAGCTCGGTGATCGTCGCCGTCATCGGCGCGGTCATTCTGCTGTTCGTGATCCGGCTATTC AAACGAGCCTGA
Upstream 100 bases:
>100_bases TTGCGTGTGCGACGCTCCGGGATCGGCGTGCGATCCGTCACGTCACAGGCAGCGCCCGACGTCGGTTCATTCGTGGGAAC TAACAAAGGAGAGGACCACC
Downstream 100 bases:
>100_bases CGTATTACGACGCCGCCCGGCGCGCCGCTCGGCCGCCGGGCGCCTTCCCGCTTCTTTCTTCGCTTTTCCTCACCTCCCCC GCTCCCTTCCTTTTCTGGCG
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFISSVIVAVIGAVILLFVIRLF KRA
Sequences:
>Translated_83_residues MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFISSVIVAVIGAVILLFVIRLF KRA >Mature_82_residues AHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFISSVIVAVIGAVILLFVIRLFK RA
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8387; Mature: 8255
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFI CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSVIVAVIGAVILLFVIRLFKRA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHGLIMWLIIGAIAGWLAGLLVKGGGFGLLVDIIVGIVGAVIGGWLAGILGIHIGGGFI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSVIVAVIGAVILLFVIRLFKRA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA