| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is fbp [H]
Identifier: 237813358
GI number: 237813358
Start: 3036534
End: 3037550
Strand: Direct
Name: fbp [H]
Synonym: GBP346_A3128
Alternate gene names: 237813358
Gene position: 3036534-3037550 (Clockwise)
Preceding gene: 237813357
Following gene: 237813359
Centisome position: 74.09
GC content: 65.29
Gene sequence:
>1017_bases ATGTCCATTACCCGACGCACCACGCTGTCCAAGTATCTGATCGAGCAGCAGCGTGAAACCCACAACCTCCCCGCCGACCT GCGCCTGCTGATCGAAGTGGTCGCGCGCGCGTGCAAGGCGATCAGCTACAACGTGAGCAAGGGCGCGTTGGGCGATGCGC TCGGCACGGCGGGCAGCGAGAACGTCCAGGGCGAAGTGCAGAAGAAGCTCGACATCCTGTCGAACGAGATCCTGCTCGAC GCGAACGAATGGGGCGGCAATCTCGCCGCGATGGCGTCCGAGGAGATGGAAACGTTCTTCCCGATCCCGGCGAACTACCC GCGCGGCGAATACCTGCTCGTGTTCGACCCGCTCGACGGCTCGTCGAACATCGACGTGAACGTGTCGATCGGCACGATCT TCTCGGTGCTGCGCTGCCCGGACGGCCAGCAGGCGACCGAACAGTCGTTCCTGCAGCCGGGCACGGAACAGGTCGCGGCG GGCTACGCGGTGTACGGCCCGCAAACCGTGTTCGTGCTGACGACGGGCAACGGCGTGAACTGCTTCACGCTCGATCGCGA AGTCGGCTCGTGGGTGCTCACGCAAAGCAATCTGCGCATCCCGGAGGACACGCGCGAATACGCGATCAACGCGTCGAACG CGCGCCACTGGTACGAACCGGTGAAGCGCTACATCGACGAGCTGAACGCGGGCGCCGAAGGCCCGCGCGGCGAGAACTTC AACATGCGCTGGATCGCGTCGATGGTCGCCGACGTGCACCGTATCCTGAACCGCGGCGGCATCTTCATGTACCCGGCCGA CAAGCGCACGCCGGATCGCCCGGGCAAGCTGCGGCTGATGTACGAGGCGAATCCGATGTCGTTCATCGTCGAGCAGGCGG GCGGCGCGGCGACGACGGGCCTGAAGCGGATCCTCGACGTGCAGCCGACGGGCCTGCACCAGCGCGTGCCGGTGATTCTC GGCTCGAAGAACGAAGTCGAGCGCGTCGCGCGTTATCACGAGCAAGCGCAGTCGTAA
Upstream 100 bases:
>100_bases TTTTCGCCGAAAAACCGTCGGCCGCCGGTCGCCGCGGGTAAAATCGAGCCTATTCCTATCCCAACATCCCATGCATTCGT CAGCCTCTCGGAGTTCCCCC
Downstream 100 bases:
>100_bases CGCAACGGCGACGTCGATGGGGCGGCGGGACCGCGCCCCCATCGCGTCGAACGGACCGGCGCGTCGAGCGGTGCGTGCCG GCGCGCTCGCGGACTGACCG
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAA GYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYEPVKRYIDELNAGAEGPRGENF NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGLKRILDVQPTGLHQRVPVIL GSKNEVERVARYHEQAQS
Sequences:
>Translated_338_residues MSITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAA GYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYEPVKRYIDELNAGAEGPRGENF NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGLKRILDVQPTGLHQRVPVIL GSKNEVERVARYHEQAQS >Mature_337_residues SITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLDA NEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAAG YAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYEPVKRYIDELNAGAEGPRGENFN MRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGLKRILDVQPTGLHQRVPVILG SKNEVERVARYHEQAQS
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=334, Percent_Identity=42.2155688622754, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI16579888, Length=334, Percent_Identity=42.2155688622754, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI22907028, Length=324, Percent_Identity=42.2839506172839, Blast_Score=250, Evalue=1e-66, Organism=Escherichia coli, GI1790679, Length=327, Percent_Identity=44.954128440367, Blast_Score=275, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17508131, Length=329, Percent_Identity=44.6808510638298, Blast_Score=280, Evalue=9e-76, Organism=Saccharomyces cerevisiae, GI6323409, Length=335, Percent_Identity=40, Blast_Score=261, Evalue=2e-70, Organism=Drosophila melanogaster, GI19921562, Length=325, Percent_Identity=43.6923076923077, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI45550998, Length=325, Percent_Identity=43.6923076923077, Blast_Score=259, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37378; Mature: 37247
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSE CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHEECCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAAGYAVYGPQTVFVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCEEEECCCEEEEEECCCCEE CFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYEPVKRYIDELNAGAEGPRGENF EEEECCCCCCEEEECCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHH LKRILDVQPTGLHQRVPVILGSKNEVERVARYHEQAQS HHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure SITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHEECCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAAGYAVYGPQTVFVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCEEEECCCEEEEEECCCCEE CFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYEPVKRYIDELNAGAEGPRGENF EEEECCCCCCEEEECCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHH LKRILDVQPTGLHQRVPVILGSKNEVERVARYHEQAQS HHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA