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The map label for this gene is tnpR [H]

Identifier: 237813324

GI number: 237813324

Start: 3003145

End: 3003720

Strand: Direct

Name: tnpR [H]

Synonym: GBP346_A3093

Alternate gene names: 237813324

Gene position: 3003145-3003720 (Clockwise)

Preceding gene: 237813322

Following gene: 237813325

Centisome position: 73.27

GC content: 61.28

Gene sequence:

>576_bases
ATGTCCCGAACCTTCGCATACGCCCGCGTCAGCACGACCGACCAAACTACAGCCAACCAACTCCGCGAGATCGAGGCGGC
CGGTTTTTCTGTCGACAAGCGCCGGGTCGTTACAGAGAGCATTTCCGGTAGCGTCAGCTCGAACCAGCGGCCAGGGTTTG
CGGAACTGCTCCTCAAGATGGAAGAAGGCGACGTATTGATCGTGACGAAACTCGACCGACTCGGTCGGAATGCGATGGAC
GTGCGCGCGACCGTTGAGGCGTTGGCAGATCGCGGCATTCGGATTCATTGCCTTGCGCTCGGCGGGGTTGACCTGACCAG
CGCGGCCGGCCGGATGACCATGCAGGTATTGAACGCCGTCGCCGAGTTTGAACGCGACTTGCTGATCGAACGAACCCAAG
CCGGTATCGCGCGAGCAAGAGCGGAAGGGAAAGCGATGGGCCGGCCGGCCGCGCTGACCAAGCAACAACAGGATGAGGCT
CGCCAGCAGTTAAGCAAAGGAGCAAGCGTGGCGAGCCTTGCAAAACAGTACGGCACAAGCCGCCAGACAATCATGCGGGT
GCGCGACGCGGCGTAA

Upstream 100 bases:

>100_bases
TCGGACATGGGTGCGCAGCCATGTACGAAAATAAGGTTTTAATATTTTCGTACATGGTCTATTATTCGTACACCCTTTTC
GAACACATTGAACGCGCCAC

Downstream 100 bases:

>100_bases
CGCCCAACCGTTCAAAATCGCTTTTTACGGGCCGCACGGCCCGTTGTTGTTTCCGTGCACGGGGGGTGGCGGCGCGGGGG
AATTTCTTTGCGCGTAGCGT

Product: resolvase, N domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSRTFAYARVSTTDQTTANQLREIEAAGFSVDKRRVVTESISGSVSSNQRPGFAELLLKMEEGDVLIVTKLDRLGRNAMD
VRATVEALADRGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARARAEGKAMGRPAALTKQQQDEA
RQQLSKGASVASLAKQYGTSRQTIMRVRDAA

Sequences:

>Translated_191_residues
MSRTFAYARVSTTDQTTANQLREIEAAGFSVDKRRVVTESISGSVSSNQRPGFAELLLKMEEGDVLIVTKLDRLGRNAMD
VRATVEALADRGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARARAEGKAMGRPAALTKQQQDEA
RQQLSKGASVASLAKQYGTSRQTIMRVRDAA
>Mature_190_residues
SRTFAYARVSTTDQTTANQLREIEAAGFSVDKRRVVTESISGSVSSNQRPGFAELLLKMEEGDVLIVTKLDRLGRNAMDV
RATVEALADRGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARARAEGKAMGRPAALTKQQQDEAR
QQLSKGASVASLAKQYGTSRQTIMRVRDAA

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787638, Length=188, Percent_Identity=57.4468085106383, Blast_Score=237, Evalue=3e-64,
Organism=Escherichia coli, GI1787827, Length=188, Percent_Identity=56.9148936170213, Blast_Score=236, Evalue=8e-64,
Organism=Escherichia coli, GI1787404, Length=182, Percent_Identity=36.8131868131868, Blast_Score=109, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 20711; Mature: 20580

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTFAYARVSTTDQTTANQLREIEAAGFSVDKRRVVTESISGSVSSNQRPGFAELLLKM
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHEEC
EEGDVLIVTKLDRLGRNAMDVRATVEALADRGIRIHCLALGGVDLTSAAGRMTMQVLNAV
CCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
AEFERDLLIERTQAGIARARAEGKAMGRPAALTKQQQDEARQQLSKGASVASLAKQYGTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
RQTIMRVRDAA
HHHHHHHHCCC
>Mature Secondary Structure 
SRTFAYARVSTTDQTTANQLREIEAAGFSVDKRRVVTESISGSVSSNQRPGFAELLLKM
CCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHEEC
EEGDVLIVTKLDRLGRNAMDVRATVEALADRGIRIHCLALGGVDLTSAAGRMTMQVLNAV
CCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
AEFERDLLIERTQAGIARARAEGKAMGRPAALTKQQQDEARQQLSKGASVASLAKQYGTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
RQTIMRVRDAA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027041 [H]