| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813320
Identifier: 237813320
GI number: 237813320
Start: 3002041
End: 3002187
Strand: Reverse
Name: 237813320
Synonym: GBP346_A3089
Alternate gene names: NA
Gene position: 3002187-3002041 (Counterclockwise)
Preceding gene: 237813323
Following gene: 237813319
Centisome position: 73.25
GC content: 51.7
Gene sequence:
>147_bases ATGCCTTTTGCCTGGTCGAAGCAGCCGTCCAATCAACTCGTACTCTTTGTCTATGAGGAATTCGAGGTCACCCGACGGTT TCGTCGAGACCGGAAGGACACGCGATGGAATATAGCGGTGAAGATCCGTATTGAGGGCTTGCTTTAG
Upstream 100 bases:
>100_bases TCTCAATCCGGTCGATGTCCTTCTCGCTGATTTCGACATTGTCGGCTATCAACGCTTCCATCGCCAAGAGTGACCTGACT CTTGCGCGCGCCTCGTCGCG
Downstream 100 bases:
>100_bases GTAAGCGTCGAACGCCGTTACTAACGCACGAGTATGCATATAAAGCAACTCCTCGGACACAAACAAGAACCAGTGCTGAC TTGCGTCTCTCAGTGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MPFAWSKQPSNQLVLFVYEEFEVTRRFRRDRKDTRWNIAVKIRIEGLL
Sequences:
>Translated_48_residues MPFAWSKQPSNQLVLFVYEEFEVTRRFRRDRKDTRWNIAVKIRIEGLL >Mature_47_residues PFAWSKQPSNQLVLFVYEEFEVTRRFRRDRKDTRWNIAVKIRIEGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5941; Mature: 5810
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFAWSKQPSNQLVLFVYEEFEVTRRFRRDRKDTRWNIAVKIRIEGLL CCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEEEEEEECC >Mature Secondary Structure PFAWSKQPSNQLVLFVYEEFEVTRRFRRDRKDTRWNIAVKIRIEGLL CCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA