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The map label for this gene is 237813275

Identifier: 237813275

GI number: 237813275

Start: 2954594

End: 2955790

Strand: Reverse

Name: 237813275

Synonym: GBP346_A3041

Alternate gene names: NA

Gene position: 2955790-2954594 (Counterclockwise)

Preceding gene: 237813276

Following gene: 237813272

Centisome position: 72.12

GC content: 68.84

Gene sequence:

>1197_bases
ATGAGCGAACGATACGACGTCGAATACCCGGTGATGCCGCCCGCGCCCCGCAAGGGGCGCGGCGCGGTGGGCAACCTGCA
GGGGCGCTACGAGAGCGTCGAGCGCGAGGCGGTCGACGACGGCTGGACGCGCGACGACGACGGCGAGCCGCGCGCGCCGC
TGCGCACGCAGGTGTTCGAGGAGCGCGCCAGGACGATCCTCACGCGCAATGCGTCGCCCGACATTCCGTTCAATGTATCG
CTGAATCCGTATCGCGGCTGCGAGCACGGCTGCATTTACTGCTTCGCGCGGCCGACGCACAGCTATCTCGGGCTGTCGCC
GGGGCTCGATTTCGAGAGCCGGATCTACGCGAAGGTGAATGCCGCGGAGTTGCTCGCGCGCGAACTCGCGAAGCCGCGCT
ACGTGCCCGAGCCGATCGCGCTCGGCGTGAATACGGACGCGTATCAGCCGGTCGAGCGCGAACGGCGGATCACGCGGCAG
GTGATCCAGGTGATGCATGACCATGGTCAGCCGTTTGCCGCGATCACGAAGTCGTCGCTGATCGAGCGTGATCTCGATCT
GCTCGCGCCGATGGCCGAGCGCCGGCAGGTGATGGCGGCCGTCACGATCACGACGCTCGATCCCGAGCTCGCGCGCGCTC
GAGCCGCGCGCCGCGACGCCCTCGCGCCGGCTGCGGACGATCCGCGCGCTGCGCGACGCGGGGGTGCCGGTCGGCGTGAG
CATCGCGCCGATGATCCCGTTCGTCACCGAACCGGATCTCGAGCGCGTGCTCGAGGCGTGCGCGGACGCGGGGGCGACGC
ACGCGAGCTATATCGTGTTGCGATTGCCGTGGGAGGTCGCGCCGCTTTTCACCGAATGGCTCGCCGCGCATTTTCCGGAT
CGAGCGGAGCGCGTGATGGCGCGTGTGAGGGACATGCGCGGCGGCAAGGATTACGACGCGGATTTCAGCCGCCGGATGAA
AGGCGAAGGAATGTGGGCCGAGCTGCTCAAGCAGCGCTTCCGGATGGCGGTCAAGCGCTGCGGGCTGAACGAACGCGCGC
GGGGAATTCTCGATTTTTCGCAGTTTTGCGCGCCGCGACGGTCGAAACCGCCGCCGCCCGTGCGACCGCGTGCGGCGGCG
CAAACCGGAGACCAGCCGCAGCTCAGTCTGTTCTGAGCGGCGCGGGCGATGCGCCGCGCCGGCGGATACGTCATTGA

Upstream 100 bases:

>100_bases
GCGGGGCCGAAGCGCTTGGCACGAACCGCCAATTACTGTATGTTTATACAGTAATTGGCGGTTTTGTCATTGGCGGCGCC
GGCCGCGTACCAGAGGCACG

Downstream 100 bases:

>100_bases
GAAATCTGCTTGGCGGCCTCGACCTGCGATTCGAAGTACGTCTGGAACGCGAGCGCGAGCCCCGTCATCAGCAAAAAGGC
GCCGATCAGCAGCGAAAAGA

Product: radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSERYDVEYPVMPPAPRKGRGAVGNLQGRYESVEREAVDDGWTRDDDGEPRAPLRTQVFEERARTILTRNASPDIPFNVS
LNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQ
VIQVMHDHGQPFAAITKSSLIERDLDLLAPMAERRQVMAAVTITTLDPELARARAARRDALAPAADDPRAARRGGAGRRE
HRADDPVRHRTGSRARARGVRGRGGDARELYRVAIAVGGRAAFHRMARRAFSGSSGARDGACEGHARRQGLRRGFQPPDE
RRRNVGRAAQAALPDGGQALRAERTRAGNSRFFAVLRAATVETAAARATACGGANRRPAAAQSVLSGAGDAPRRRIRH

Sequences:

>Translated_398_residues
MSERYDVEYPVMPPAPRKGRGAVGNLQGRYESVEREAVDDGWTRDDDGEPRAPLRTQVFEERARTILTRNASPDIPFNVS
LNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQ
VIQVMHDHGQPFAAITKSSLIERDLDLLAPMAERRQVMAAVTITTLDPELARARAARRDALAPAADDPRAARRGGAGRRE
HRADDPVRHRTGSRARARGVRGRGGDARELYRVAIAVGGRAAFHRMARRAFSGSSGARDGACEGHARRQGLRRGFQPPDE
RRRNVGRAAQAALPDGGQALRAERTRAGNSRFFAVLRAATVETAAARATACGGANRRPAAAQSVLSGAGDAPRRRIRH
>Mature_397_residues
SERYDVEYPVMPPAPRKGRGAVGNLQGRYESVEREAVDDGWTRDDDGEPRAPLRTQVFEERARTILTRNASPDIPFNVSL
NPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQV
IQVMHDHGQPFAAITKSSLIERDLDLLAPMAERRQVMAAVTITTLDPELARARAARRDALAPAADDPRAARRGGAGRREH
RADDPVRHRTGSRARARGVRGRGGDARELYRVAIAVGGRAAFHRMARRAFSGSSGARDGACEGHARRQGLRRGFQPPDER
RRNVGRAAQAALPDGGQALRAERTRAGNSRFFAVLRAATVETAAARATACGGANRRPAAAQSVLSGAGDAPRRRIRH

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43697; Mature: 43566

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERYDVEYPVMPPAPRKGRGAVGNLQGRYESVEREAVDDGWTRDDDGEPRAPLRTQVFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ERARTILTRNASPDIPFNVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVN
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHH
AAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQVIQVMHDHGQPFAAITKSSL
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IERDLDLLAPMAERRQVMAAVTITTLDPELARARAARRDALAPAADDPRAARRGGAGRRE
HHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
HRADDPVRHRTGSRARARGVRGRGGDARELYRVAIAVGGRAAFHRMARRAFSGSSGARDG
CCCCCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
ACEGHARRQGLRRGFQPPDERRRNVGRAAQAALPDGGQALRAERTRAGNSRFFAVLRAAT
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
VETAAARATACGGANRRPAAAQSVLSGAGDAPRRRIRH
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure 
SERYDVEYPVMPPAPRKGRGAVGNLQGRYESVEREAVDDGWTRDDDGEPRAPLRTQVFE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ERARTILTRNASPDIPFNVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVN
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHH
AAELLARELAKPRYVPEPIALGVNTDAYQPVERERRITRQVIQVMHDHGQPFAAITKSSL
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IERDLDLLAPMAERRQVMAAVTITTLDPELARARAARRDALAPAADDPRAARRGGAGRRE
HHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
HRADDPVRHRTGSRARARGVRGRGGDARELYRVAIAVGGRAAFHRMARRAFSGSSGARDG
CCCCCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
ACEGHARRQGLRRGFQPPDERRRNVGRAAQAALPDGGQALRAERTRAGNSRFFAVLRAAT
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
VETAAARATACGGANRRPAAAQSVLSGAGDAPRRRIRH
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]