Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813274

Identifier: 237813274

GI number: 237813274

Start: 2954133

End: 2954600

Strand: Direct

Name: 237813274

Synonym: GBP346_A3042

Alternate gene names: NA

Gene position: 2954133-2954600 (Clockwise)

Preceding gene: 237813273

Following gene: 237813277

Centisome position: 72.08

GC content: 67.09

Gene sequence:

>468_bases
ATGTCCAGCAGCACGTCCACGCCACCCCGCTTCCGCTCCAAGACGCTCACCGCCCTGCTCGCTTTCCTGTTCGGCTCGCT
CGGCGCGCACCGTTTCTATCTGTACGGCTGGAAGGACCTCGCGGGCTGGGCGCACGTGCTCGCGACGATCGTCGGCGTTC
CCGGCTTCATGCTGCTCGCGGCATCGGGGCGCGCCGCCGCGCTCGGCTGGTGGCTCGCCGTGCCCGGCGCGATATCGCTG
CTCGCCGCGTTTCTCGCCGCGCTCGTCTACGGGCTGCGCCCCGACGACAAGTGGGACGCGCAATTCAACGCATCGACGGG
GCGCCACAGCCGATCCGGCTGGGGTGTCGTGTTCGTCGTCATCTTTTCGCTGCTGATCGGCGCCTTTTTGCTGATGACGG
GGCTCGCGCTCGCGTTCCAGACGTACTTCGAATCGCAGGTCGAGGCCGCCAAGCAGATTTCTCAATGA

Upstream 100 bases:

>100_bases
CGTGGCGTGACCGCGCCGCACCGCGCATCGTAGAATGCGAGCCGACCGCCGCGCCCGGGCTTCGCCGGGTGCCCACGAAG
AAGACCCACTGCCTCCCGAC

Downstream 100 bases:

>100_bases
CGTATCCGCCGGCGCGGCGCATCGCCCGCGCCGCTCAGAACAGACTGAGCTGCGGCTGGTCTCCGGTTTGCGCCGCCGCA
CGCGGTCGCACGGGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLAASGRAAALGWWLAVPGAISL
LAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVVIFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ

Sequences:

>Translated_155_residues
MSSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLAASGRAAALGWWLAVPGAISL
LAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVVIFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ
>Mature_154_residues
SSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLAASGRAAALGWWLAVPGAISLL
AAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVVIFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ

Specific function: Unknown

COG id: COG2314

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16674; Mature: 16542

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHH
ASGRAAALGWWLAVPGAISLLAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHH
ASGRAAALGWWLAVPGAISLLAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA