| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813274
Identifier: 237813274
GI number: 237813274
Start: 2954133
End: 2954600
Strand: Direct
Name: 237813274
Synonym: GBP346_A3042
Alternate gene names: NA
Gene position: 2954133-2954600 (Clockwise)
Preceding gene: 237813273
Following gene: 237813277
Centisome position: 72.08
GC content: 67.09
Gene sequence:
>468_bases ATGTCCAGCAGCACGTCCACGCCACCCCGCTTCCGCTCCAAGACGCTCACCGCCCTGCTCGCTTTCCTGTTCGGCTCGCT CGGCGCGCACCGTTTCTATCTGTACGGCTGGAAGGACCTCGCGGGCTGGGCGCACGTGCTCGCGACGATCGTCGGCGTTC CCGGCTTCATGCTGCTCGCGGCATCGGGGCGCGCCGCCGCGCTCGGCTGGTGGCTCGCCGTGCCCGGCGCGATATCGCTG CTCGCCGCGTTTCTCGCCGCGCTCGTCTACGGGCTGCGCCCCGACGACAAGTGGGACGCGCAATTCAACGCATCGACGGG GCGCCACAGCCGATCCGGCTGGGGTGTCGTGTTCGTCGTCATCTTTTCGCTGCTGATCGGCGCCTTTTTGCTGATGACGG GGCTCGCGCTCGCGTTCCAGACGTACTTCGAATCGCAGGTCGAGGCCGCCAAGCAGATTTCTCAATGA
Upstream 100 bases:
>100_bases CGTGGCGTGACCGCGCCGCACCGCGCATCGTAGAATGCGAGCCGACCGCCGCGCCCGGGCTTCGCCGGGTGCCCACGAAG AAGACCCACTGCCTCCCGAC
Downstream 100 bases:
>100_bases CGTATCCGCCGGCGCGGCGCATCGCCCGCGCCGCTCAGAACAGACTGAGCTGCGGCTGGTCTCCGGTTTGCGCCGCCGCA CGCGGTCGCACGGGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLAASGRAAALGWWLAVPGAISL LAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVVIFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ
Sequences:
>Translated_155_residues MSSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLAASGRAAALGWWLAVPGAISL LAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVVIFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ >Mature_154_residues SSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLAASGRAAALGWWLAVPGAISLL AAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVVIFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ
Specific function: Unknown
COG id: COG2314
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16674; Mature: 16542
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHH ASGRAAALGWWLAVPGAISLLAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSSTSTPPRFRSKTLTALLAFLFGSLGAHRFYLYGWKDLAGWAHVLATIVGVPGFMLLA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHH ASGRAAALGWWLAVPGAISLLAAFLAALVYGLRPDDKWDAQFNASTGRHSRSGWGVVFVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IFSLLIGAFLLMTGLALAFQTYFESQVEAAKQISQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA