Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is yjgA [C]

Identifier: 237813259

GI number: 237813259

Start: 2941849

End: 2942457

Strand: Direct

Name: yjgA [C]

Synonym: GBP346_A3026

Alternate gene names: 237813259

Gene position: 2941849-2942457 (Clockwise)

Preceding gene: 237813255

Following gene: 237813260

Centisome position: 71.78

GC content: 69.46

Gene sequence:

>609_bases
ATGCCGCCCATGACACGCAAAACCCGTATCCAACCGATCGAGCACCCCGGCGAGGACGCCGACCACGGCTACGATCGCCC
CAGCAAGTCCCAGTTGAAGCGCGACATGCACGCGCTGCAGGAACTGGGCGCCGCCCTCGTCGAGCTGCCGAAGGACGCGT
TCAAGCGCATGCCGATGCCGGAGGATCTCGCCGACGCGGTGCGCGAGGCGCGCCGCATCACCGATCACGAAGGCAAGCGC
CGCCAGCTCCAGTACGTCGGGCGCGTGATGCGCTCGCTCAGCGCCGACGAGACGGCCGCGCTGCGCGCGGCGCTCGACGC
GCAGCGCGGCGTGAACAAGGCCGAGACGGCCCGCCTGCACTGGATCGAGCGCACGCGCGAGCAACTGCTCGCGAACGACG
ATGCGCTGACCGCGTTCGTGCGCGAGCATCCGTCGGCCGACGTGCAGGAAGGCCGCACGCTGATCCGCAACGCACGCAAG
GAGGCGCAGCAAGGCAAGCCGCCGCGCTACTTCCGCGAGCTGTTCCAGTGGATCAAGACGGCGAGCGGCTCGGCGAGCGA
CGCGCCCGACCTTTCACCGGATGCCGACGATGACGACGACGAAGCGTAA

Upstream 100 bases:

>100_bases
TGTGCGTATTCCGCGATCATAGCAAGGTCCGGCGCGCGCGACGCGGGTCGGCGACGCGGCGCGCGGCGAGGCGCGGCCAT
GCGGTGCCCGGCGCGATACA

Downstream 100 bases:

>100_bases
TCCCCCCGACGAACTCGTGATCGGCCTCGTGTCGATCAGCGATCGCGCAAGCAGCGGCGTCTACGAGGACAAGGGCATTC
CGGCGCTCGCCGAATGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPPMTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKR
RQLQYVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARK
EAQQGKPPRYFRELFQWIKTASGSASDAPDLSPDADDDDDEA

Sequences:

>Translated_202_residues
MPPMTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKR
RQLQYVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARK
EAQQGKPPRYFRELFQWIKTASGSASDAPDLSPDADDDDDEA
>Mature_201_residues
PPMTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKRR
QLQYVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKE
AQQGKPPRYFRELFQWIKTASGSASDAPDLSPDADDDDDEA

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family [H]

Homologues:

Organism=Escherichia coli, GI1790681, Length=153, Percent_Identity=39.2156862745098, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023153
- InterPro:   IPR006839 [H]

Pfam domain/function: PF04751 DUF615 [H]

EC number: NA

Molecular weight: Translated: 22873; Mature: 22742

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPMTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
EDLADAVREARRITDHEGKRRQLQYVGRVMRSLSADETAALRAALDAQRGVNKAETARLH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
WIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKEAQQGKPPRYFRELFQWIKT
HHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ASGSASDAPDLSPDADDDDDEA
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPMTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
EDLADAVREARRITDHEGKRRQLQYVGRVMRSLSADETAALRAALDAQRGVNKAETARLH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
WIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKEAQQGKPPRYFRELFQWIKT
HHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ASGSASDAPDLSPDADDDDDEA
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA