| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is fabH [H]
Identifier: 237813208
GI number: 237813208
Start: 2895821
End: 2896810
Strand: Reverse
Name: fabH [H]
Synonym: GBP346_A2973
Alternate gene names: 237813208
Gene position: 2896810-2895821 (Counterclockwise)
Preceding gene: 237813209
Following gene: 237813207
Centisome position: 70.68
GC content: 66.87
Gene sequence:
>990_bases ATGGCCCAATCGACCCTCTATTCCCGCGTGCTCGGCACGGGTAGCTATCTGCCGCCCGATCGCGTCACGAATCAAGAACT CGCCGATCGTCTCGCGAAGGACGGCATCGAGACGAGCGACGAGTGGATCGTCGCGCGCACGGGCATCCGCGCGCGGCACT TCGCCGCGCCCGACGTGACGACGAGCGATCTCGCGCTCGTCGCCGCGCAGCGCGCGATCGAGGCGGCCGACGTCGATCCG CAGTCGATCGACCTCATCATCGTCGCGACGTCGACGCCTGATTTCGTTTTCCCGAGCACCGCGTGCCTGCTGCAGAACAA GCTCGGCATCAAGAACGGCGGCGCCGCGTTCGACGTGCAGGCGGTATGTTCGGGCTTCGCCTACGCGCTCGCGACGGCCG ACAGCTTCATCCGCACGGGGCAGCACCGCACGGCGCTCGTCATCGGCGCGGAGACGTTCTCGCGCATTCTCGATTTCAAG GACCGTACGACCTGCGTGCTGTTCGGCGACGGCGCGGGCGCCGTCGTGCTGTCGGCGTCCGAAGAGCCGGGCATCCTCGG CAGCGCGCTGCATGCGGACGGCAGCTATTCGAACATTCTCTGCACGCCGGGCAACGTGAACCGCGGCGTCATCGCGGGCA GCGCGTTCCTGCACATGGACGGCCAGGCCGTCTTCAAGCTTGCCGTGAACGTGCTCGAGAAAGTCGCGGTCGAAGCGCTG TCGAAGGCGGAGCTCGCGTCGGAACAGGTCGATTGGCTGATTCCGCACCAGGCCAATATCCGTATCATGACAAGCACGTG CCGCAAGCTCGGCCTGCCGCAGGAACGCATGATCGTCACCGTCGACGAGCACGGCAACACGTCCGCCGCATCGATTCCGC TCGCACTCGACGTCGCCGTGCGCGACGGCCGCATCAAGCGCGGCCAGCACGTGCTGATCGAAGGCGTCGGCGGCGGCTTC ACGTGGGGCGCGTCGGTCTTCCGCTTCTGA
Upstream 100 bases:
>100_bases CGCTCGGCGAAAGCGGGCGCGACGCGAACGGAGCGGGGCAGGCGAGTCCGTCCGCAGGCCAGCCAGCCGAGCCCTCCGCC GCGCTTTCCTCGAAGACATA
Downstream 100 bases:
>100_bases CGGCCCTTCTTCGCATCCCATCGGCGCGCCATTCAAGCGCGCCGCTCGAATCGATTCAATTGGGGACGATATGAAATTCG CATTCGTTTTTCCGGGCCAG
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAQSTLYSRVLGTGSYLPPDRVTNQELADRLAKDGIETSDEWIVARTGIRARHFAAPDVTTSDLALVAAQRAIEAADVDP QSIDLIIVATSTPDFVFPSTACLLQNKLGIKNGGAAFDVQAVCSGFAYALATADSFIRTGQHRTALVIGAETFSRILDFK DRTTCVLFGDGAGAVVLSASEEPGILGSALHADGSYSNILCTPGNVNRGVIAGSAFLHMDGQAVFKLAVNVLEKVAVEAL SKAELASEQVDWLIPHQANIRIMTSTCRKLGLPQERMIVTVDEHGNTSAASIPLALDVAVRDGRIKRGQHVLIEGVGGGF TWGASVFRF
Sequences:
>Translated_329_residues MAQSTLYSRVLGTGSYLPPDRVTNQELADRLAKDGIETSDEWIVARTGIRARHFAAPDVTTSDLALVAAQRAIEAADVDP QSIDLIIVATSTPDFVFPSTACLLQNKLGIKNGGAAFDVQAVCSGFAYALATADSFIRTGQHRTALVIGAETFSRILDFK DRTTCVLFGDGAGAVVLSASEEPGILGSALHADGSYSNILCTPGNVNRGVIAGSAFLHMDGQAVFKLAVNVLEKVAVEAL SKAELASEQVDWLIPHQANIRIMTSTCRKLGLPQERMIVTVDEHGNTSAASIPLALDVAVRDGRIKRGQHVLIEGVGGGF TWGASVFRF >Mature_328_residues AQSTLYSRVLGTGSYLPPDRVTNQELADRLAKDGIETSDEWIVARTGIRARHFAAPDVTTSDLALVAAQRAIEAADVDPQ SIDLIIVATSTPDFVFPSTACLLQNKLGIKNGGAAFDVQAVCSGFAYALATADSFIRTGQHRTALVIGAETFSRILDFKD RTTCVLFGDGAGAVVLSASEEPGILGSALHADGSYSNILCTPGNVNRGVIAGSAFLHMDGQAVFKLAVNVLEKVAVEALS KAELASEQVDWLIPHQANIRIMTSTCRKLGLPQERMIVTVDEHGNTSAASIPLALDVAVRDGRIKRGQHVLIEGVGGGFT WGASVFRF
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=324, Percent_Identity=52.1604938271605, Blast_Score=338, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 34853; Mature: 34722
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSTLYSRVLGTGSYLPPDRVTNQELADRLAKDGIETSDEWIVARTGIRARHFAAPDVT CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCC TSDLALVAAQRAIEAADVDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIKNGGAAFDVQ HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEHH AVCSGFAYALATADSFIRTGQHRTALVIGAETFSRILDFKDRTTCVLFGDGAGAVVLSAS HHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEECC EEPGILGSALHADGSYSNILCTPGNVNRGVIAGSAFLHMDGQAVFKLAVNVLEKVAVEAL CCCCCEEEEEECCCCCCEEEECCCCCCCCEEECEEEEEECCHHHHHHHHHHHHHHHHHHH SKAELASEQVDWLIPHQANIRIMTSTCRKLGLPQERMIVTVDEHGNTSAASIPLALDVAV HHHHHHHHCCCEECCCCCCEEEEEHHHHHHCCCCHHEEEEEECCCCCCCEECCEEEEEEE RDGRIKRGQHVLIEGVGGGFTWGASVFRF ECCCCCCCCEEEEEECCCCEEHHHHHHCC >Mature Secondary Structure AQSTLYSRVLGTGSYLPPDRVTNQELADRLAKDGIETSDEWIVARTGIRARHFAAPDVT CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCC TSDLALVAAQRAIEAADVDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIKNGGAAFDVQ HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEHH AVCSGFAYALATADSFIRTGQHRTALVIGAETFSRILDFKDRTTCVLFGDGAGAVVLSAS HHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEECC EEPGILGSALHADGSYSNILCTPGNVNRGVIAGSAFLHMDGQAVFKLAVNVLEKVAVEAL CCCCCEEEEEECCCCCCEEEECCCCCCCCEEECEEEEEECCHHHHHHHHHHHHHHHHHHH SKAELASEQVDWLIPHQANIRIMTSTCRKLGLPQERMIVTVDEHGNTSAASIPLALDVAV HHHHHHHHCCCEECCCCCCEEEEEHHHHHHCCCCHHEEEEEECCCCCCCEECCEEEEEEE RDGRIKRGQHVLIEGVGGGFTWGASVFRF ECCCCCCCCEEEEEECCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA