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The map label for this gene is rseB [H]

Identifier: 237813200

GI number: 237813200

Start: 2889306

End: 2890349

Strand: Reverse

Name: rseB [H]

Synonym: GBP346_A2965

Alternate gene names: 237813200

Gene position: 2890349-2889306 (Counterclockwise)

Preceding gene: 237813201

Following gene: 237813199

Centisome position: 70.52

GC content: 67.82

Gene sequence:

>1044_bases
TTGCAGTTGAATCAAGCCATCCTCGGTTGGAGACGGCTGCCGGCGCTGTTGCTGTGCGCGGCCGCGCTGTTGTCCGCCCA
GCCCCGCGCCTTCGCGCAACCCGACGATCCCGTGGCCACCCGACGCCAGGCCGCCGAGTGGCTCGATCGCATCCAGCAGG
CCGCGCAGCAGCAGAACTACGAGGGGACGTTCGTCTATCAGCGCGGCGCTTACGTGCAATCGTCGCGGATCGTTCACGTC
GCGACGAAGGGCGACGGCGAATACGAGCGCGTCGAAAGCCTCGACGGCAAGCCCCGCAAGCTGCTGCGCCACAACGACGA
TCTCTACACGTTCGTGCCCGAACGGCGGCTTTGCGTCGTCGAGCGTCGGCAGAACAAGGATTCGTTTCCCGCGCTGCTCG
GCGCGAGCGGTGAGCAGGTGCTGTCCGTCTACGAGCCGAAGTCGCTCGGGCGCGACCGCGTCGCGGGCCTCGACGCGCAG
GTCGTCGAGCTCGTGCCGAAGGACGCGTACCGCTTCGCATACAAGCTGTGGACCGACGCGAAGACGGGGCTTCTGCTGCG
TTCGCAGACGCTCGACACCGACGATCGCGTGCTCGAGCAGATCGCCTTCTCGCAGTTGCAGCTCGGCGCCGCTGCGCCGA
GCCAGAAGACCGCGATCGCGGCCGGCATGCGCAATCTCGGCGGCTGGACCGTCGTGCGGCCGCCCGTCGCGCCCGTCGAC
ATCGAGGCGCAGGGCTGGCAGATCGCACCGACCGTCGCGGGCTTTCGCAAGATCCGCGAAGTGCGCCGCCCGATGGCCGC
GCGCGACGCGAACGATCCGCCGATTGCCGTCGATCAGGCCGTGTTCACCGACGGCCTCGCGACGATCTCGGTCTTCATCG
AACCCGCGGAGAAGAACAGCCGCAAGGAAGGCGCGGGCGGCACGGGCGCGACGCACGTGCTCGTCAAGCGCCGCGGCGAT
TTCTGGATCACGGTTCTCGGCGAAGCGCCGCCCTCGACGTTGCAGCAGTTCGCGTCTGCCATAGAATACAAGGCTTCCAA
GTAA

Upstream 100 bases:

>100_bases
AAGCGCATCAGCAATTCGCGCAGCAGCCCGTCGTGACGGGCTCGATGCCGGTCATCCGCACCGCCGTCACCACGCAAGGC
CAATAAACTCGATGCGGACG

Downstream 100 bases:

>100_bases
CCCTTCGGTTTCCGACATGATGAATCCCTCGCTGCGCACCTGGCTCGTCGCCGCGGCGGTGACGGCCTTGACGCCGCTTG
CCGCGCAATCGGCGACGGCG

Product: sigma factor negative regulatory protein, MucB/ResB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MQLNQAILGWRRLPALLLCAAALLSAQPRAFAQPDDPVATRRQAAEWLDRIQQAAQQQNYEGTFVYQRGAYVQSSRIVHV
ATKGDGEYERVESLDGKPRKLLRHNDDLYTFVPERRLCVVERRQNKDSFPALLGASGEQVLSVYEPKSLGRDRVAGLDAQ
VVELVPKDAYRFAYKLWTDAKTGLLLRSQTLDTDDRVLEQIAFSQLQLGAAAPSQKTAIAAGMRNLGGWTVVRPPVAPVD
IEAQGWQIAPTVAGFRKIREVRRPMAARDANDPPIAVDQAVFTDGLATISVFIEPAEKNSRKEGAGGTGATHVLVKRRGD
FWITVLGEAPPSTLQQFASAIEYKASK

Sequences:

>Translated_347_residues
MQLNQAILGWRRLPALLLCAAALLSAQPRAFAQPDDPVATRRQAAEWLDRIQQAAQQQNYEGTFVYQRGAYVQSSRIVHV
ATKGDGEYERVESLDGKPRKLLRHNDDLYTFVPERRLCVVERRQNKDSFPALLGASGEQVLSVYEPKSLGRDRVAGLDAQ
VVELVPKDAYRFAYKLWTDAKTGLLLRSQTLDTDDRVLEQIAFSQLQLGAAAPSQKTAIAAGMRNLGGWTVVRPPVAPVD
IEAQGWQIAPTVAGFRKIREVRRPMAARDANDPPIAVDQAVFTDGLATISVFIEPAEKNSRKEGAGGTGATHVLVKRRGD
FWITVLGEAPPSTLQQFASAIEYKASK
>Mature_347_residues
MQLNQAILGWRRLPALLLCAAALLSAQPRAFAQPDDPVATRRQAAEWLDRIQQAAQQQNYEGTFVYQRGAYVQSSRIVHV
ATKGDGEYERVESLDGKPRKLLRHNDDLYTFVPERRLCVVERRQNKDSFPALLGASGEQVLSVYEPKSLGRDRVAGLDAQ
VVELVPKDAYRFAYKLWTDAKTGLLLRSQTLDTDDRVLEQIAFSQLQLGAAAPSQKTAIAAGMRNLGGWTVVRPPVAPVD
IEAQGWQIAPTVAGFRKIREVRRPMAARDANDPPIAVDQAVFTDGLATISVFIEPAEKNSRKEGAGGTGATHVLVKRRGD
FWITVLGEAPPSTLQQFASAIEYKASK

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=306, Percent_Identity=27.4509803921569, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 38260; Mature: 38260

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNQAILGWRRLPALLLCAAALLSAQPRAFAQPDDPVATRRQAAEWLDRIQQAAQQQNY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EGTFVYQRGAYVQSSRIVHVATKGDGEYERVESLDGKPRKLLRHNDDLYTFVPERRLCVV
CCEEEEECCCEEECCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCEEEECCCCCEEHH
ERRQNKDSFPALLGASGEQVLSVYEPKSLGRDRVAGLDAQVVELVPKDAYRFAYKLWTDA
HHHCCCCCCCHHHCCCHHHHHEECCCHHCCCHHHCCCCHHHHHHCCCHHHHHHHHHHCCC
KTGLLLRSQTLDTDDRVLEQIAFSQLQLGAAAPSQKTAIAAGMRNLGGWTVVRPPVAPVD
CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEE
IEAQGWQIAPTVAGFRKIREVRRPMAARDANDPPIAVDQAVFTDGLATISVFIEPAEKNS
ECCCCCEECHHHHHHHHHHHHHCCHHHCCCCCCCCEECHHHHHCCCEEEEEEEECCCCCC
RKEGAGGTGATHVLVKRRGDFWITVLGEAPPSTLQQFASAIEYKASK
CCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQLNQAILGWRRLPALLLCAAALLSAQPRAFAQPDDPVATRRQAAEWLDRIQQAAQQQNY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EGTFVYQRGAYVQSSRIVHVATKGDGEYERVESLDGKPRKLLRHNDDLYTFVPERRLCVV
CCEEEEECCCEEECCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCEEEECCCCCEEHH
ERRQNKDSFPALLGASGEQVLSVYEPKSLGRDRVAGLDAQVVELVPKDAYRFAYKLWTDA
HHHCCCCCCCHHHCCCHHHHHEECCCHHCCCHHHCCCCHHHHHHCCCHHHHHHHHHHCCC
KTGLLLRSQTLDTDDRVLEQIAFSQLQLGAAAPSQKTAIAAGMRNLGGWTVVRPPVAPVD
CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEE
IEAQGWQIAPTVAGFRKIREVRRPMAARDANDPPIAVDQAVFTDGLATISVFIEPAEKNS
ECCCCCEECHHHHHHHHHHHHHCCHHHCCCCCCCCEECHHHHHCCCEEEEEEEECCCCCC
RKEGAGGTGATHVLVKRRGDFWITVLGEAPPSTLQQFASAIEYKASK
CCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]