| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813188
Identifier: 237813188
GI number: 237813188
Start: 2877225
End: 2877365
Strand: Reverse
Name: 237813188
Synonym: GBP346_A2953
Alternate gene names: NA
Gene position: 2877365-2877225 (Counterclockwise)
Preceding gene: 237813190
Following gene: 237813185
Centisome position: 70.2
GC content: 43.97
Gene sequence:
>141_bases ATGCCCCATCGCGCACTTGGCGTACGGTATTTGTTATCGACTATAAAACAGTTACGGATGATACAAATTGAATCCCGTCA GGGCTTCTTCAAAGCATTGTTTATGATGTGGCGCCTTTATGCAATAAGCGGCGTCGAATAA
Upstream 100 bases:
>100_bases TCGACAATCAGGGCGTGTGGCATGGTGTGCGCGAGTTGAAAGACCGGTCCATCAGCCGGACCGGCGTACGGCCCCCATTT CGGGATGAGAAATGAATTTT
Downstream 100 bases:
>100_bases ACAAAAAGCGCCCCGAAGGGCGCTTTATTCGATATGTTGGCGCAATCGGCGCTTACGCGCGGCTGCGGTACTCGTTCGTC CGCGTGTCGATTTCGATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MPHRALGVRYLLSTIKQLRMIQIESRQGFFKALFMMWRLYAISGVE
Sequences:
>Translated_46_residues MPHRALGVRYLLSTIKQLRMIQIESRQGFFKALFMMWRLYAISGVE >Mature_45_residues PHRALGVRYLLSTIKQLRMIQIESRQGFFKALFMMWRLYAISGVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5488; Mature: 5357
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.7 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRALGVRYLLSTIKQLRMIQIESRQGFFKALFMMWRLYAISGVE CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PHRALGVRYLLSTIKQLRMIQIESRQGFFKALFMMWRLYAISGVE CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA