| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813159
Identifier: 237813159
GI number: 237813159
Start: 2849555
End: 2849977
Strand: Direct
Name: 237813159
Synonym: GBP346_A2921
Alternate gene names: NA
Gene position: 2849555-2849977 (Clockwise)
Preceding gene: 237813157
Following gene: 237813160
Centisome position: 69.53
GC content: 70.21
Gene sequence:
>423_bases TTGGCACTGGCGCCAGCGGCGGCCGCCGCGCCTGCCTGCGGCCCGGCGGCGACGGGCGCGGCGCTCGAAGCGCCACCCGA AGCGGCCGCCGGCGCCGAGGAGGTACGCGCCGCCGGTCCCACGGCCGCGCTCGCGGCGAATTGCGAAGCGGCAAGCTGTG CCGCGGCAGGCGGCGAAGCGGCGAACGCCGGCGTCTGCGGCACCGCGGCCGCCGCCGATATCGCGGCGAGCCGCGCGAAC CACACTATGCGAATCTGGAACATCGTCGAGGCCGGAAAGAGTAAAGGAAGCGTGAAGGAGGCGGCTCGCCCGACATCCGT GCAAGCCTCGCGCCATTTTACTTTCGGCGGGCTGACGCCCCTCCGATACCGTATTACCGGATGCTTCCGTGAATGCGGGA AAGTCATGTATCGTTCGACGTAA
Upstream 100 bases:
>100_bases CTTAGCGCGCGCGGCGGCGCTCACCGCGCCGGCACTGGCACTGGCACTGGCACTGGCACTGGCACTGGCACTGGCACTGG CACCGGCACCGGCACCGGCA
Downstream 100 bases:
>100_bases TCCGGCGAGCTCGCCGCGCGCCGGCACACTCGATCATGAAAAACGTCCTCAGCATCCAGTCGCACGTCATCTACGGACAT GCGGGCAACAGCGCCGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MALAPAAAAAPACGPAATGAALEAPPEAAAGAEEVRAAGPTAALAANCEAASCAAAGGEAANAGVCGTAAAADIAASRAN HTMRIWNIVEAGKSKGSVKEAARPTSVQASRHFTFGGLTPLRYRITGCFRECGKVMYRST
Sequences:
>Translated_140_residues MALAPAAAAAPACGPAATGAALEAPPEAAAGAEEVRAAGPTAALAANCEAASCAAAGGEAANAGVCGTAAAADIAASRAN HTMRIWNIVEAGKSKGSVKEAARPTSVQASRHFTFGGLTPLRYRITGCFRECGKVMYRST >Mature_139_residues ALAPAAAAAPACGPAATGAALEAPPEAAAGAEEVRAAGPTAALAANCEAASCAAAGGEAANAGVCGTAAAADIAASRANH TMRIWNIVEAGKSKGSVKEAARPTSVQASRHFTFGGLTPLRYRITGCFRECGKVMYRST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13733; Mature: 13601
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAPAAAAAPACGPAATGAALEAPPEAAAGAEEVRAAGPTAALAANCEAASCAAAGGEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCHHHHCCCCCC ANAGVCGTAAAADIAASRANHTMRIWNIVEAGKSKGSVKEAARPTSVQASRHFTFGGLTP CCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCH LRYRITGCFRECGKVMYRST HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALAPAAAAAPACGPAATGAALEAPPEAAAGAEEVRAAGPTAALAANCEAASCAAAGGEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCHHHHCCCCCC ANAGVCGTAAAADIAASRANHTMRIWNIVEAGKSKGSVKEAARPTSVQASRHFTFGGLTP CCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCH LRYRITGCFRECGKVMYRST HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA