| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is astE [H]
Identifier: 237813140
GI number: 237813140
Start: 2828772
End: 2829821
Strand: Reverse
Name: astE [H]
Synonym: GBP346_A2902
Alternate gene names: 237813140
Gene position: 2829821-2828772 (Counterclockwise)
Preceding gene: 237813141
Following gene: 237813138
Centisome position: 69.04
GC content: 73.14
Gene sequence:
>1050_bases ATGACTTCCAGCGCTGATTCCGGCCGCGACGCCGCGTGGCTCGACGATTTCCTCGCGCTGACGCTCGCGGGCGACGCGCC GCCCGCGGAGGCGGGCGAGTGCGCGGCGCGCGCGGTGCGCTGGCGCTGGCTTGGCGACGGCTTGCTGCGGCTCGAGCCCG CCGACGCGGCGCAGCGCATGCAGAGCGTGCTCGTGTCGGCGGGCGTGCACGGCGACGAGACCGCGCCGATCGAACTGCTG TCGACGCTCGTGCGCGACATCGCGCGCGGTGCGTTGCCGCTGCGCTGCCGCCTGCTCGTCGCGCTCGGCAATCCGGGCGC GATGCGAGCGGGCGAGCGCTATCTCGACGACGATCTGAACCGGCTGTTCGGCGGCCGCCACGCGCAGCTCGCGGCGAGCC GCGAGGCGCCGCGCGCCGCGCAACTGGAGGCCGCCGCGGCGTTGTTCTTCTCGACGGCGGGCCGCGCGCGCGGCGCGCGC TGGCACATCGACATGCACACGGCGATTCGCGCGTCGGTGTTCGAGCAGTTCGCGCTGCTGCCGCACACGGGCGAGCCGCC GACGCGCACGATGTTCGAGTGGCTCGGCGAGGCGCAGATCGCCGCGGTGCTGCTGCATACCACGAAGGGCAGCACGTTCT CGCATTTCACCGCGCAAGCCTGCGGCGCGCTCGCCTGCACGCTCGAGCTCGGCAAGGTGATGCCGTTCGGCGCGAATGAT CTGTCGCGCTTCGCGCCCGCCGACGCGGCGGTGCGCCGCCTCGTGTCCGGCCGCCGCGACGCGCCGCGCGGCGCGCTGCC GCGCGCGTTCACGGTCGTCGACCAGATCACGAAGCAAAGCGATGCGCTCGAACTGTTCGTCGCGAACGACGTGCCGAATT TCACGCCGTTCGCGCGCGGCACGCTGCTCGCGCGCGACGGCGACTATCGCTACGCGGTGCGGCACGAGCAGGAGCGCATC GTGTTTCCGAATCCGTCGGTGAAGCCCGGTTTGCGCGCGGGGCTGCTCGTGATCGAGACGACGCGCGACACCCACGCGGC GCTCGCGTGA
Upstream 100 bases:
>100_bases GACCGGCTGTCGCCCGTCGATCTCGCCGACCCCGCGCTGCTCGACGAATCGCGCACCGCGCTCGACGAATTGACGCAGAT CCTCGGCCTCGGCTCGCTCT
Downstream 100 bases:
>100_bases CGCGCGCGCGCCGGCCTGGCGCTCCGCGCGCGTCAACGGCCGAGGCCTTCGGCCGCGAGCGCTTCGCCGACCTTCGCCCG CGCGCCCACCCGCGCCATGA
Product: succinylglutamate desuccinylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTSSADSGRDAAWLDDFLALTLAGDAPPAEAGECAARAVRWRWLGDGLLRLEPADAAQRMQSVLVSAGVHGDETAPIELL STLVRDIARGALPLRCRLLVALGNPGAMRAGERYLDDDLNRLFGGRHAQLAASREAPRAAQLEAAAALFFSTAGRARGAR WHIDMHTAIRASVFEQFALLPHTGEPPTRTMFEWLGEAQIAAVLLHTTKGSTFSHFTAQACGALACTLELGKVMPFGAND LSRFAPADAAVRRLVSGRRDAPRGALPRAFTVVDQITKQSDALELFVANDVPNFTPFARGTLLARDGDYRYAVRHEQERI VFPNPSVKPGLRAGLLVIETTRDTHAALA
Sequences:
>Translated_349_residues MTSSADSGRDAAWLDDFLALTLAGDAPPAEAGECAARAVRWRWLGDGLLRLEPADAAQRMQSVLVSAGVHGDETAPIELL STLVRDIARGALPLRCRLLVALGNPGAMRAGERYLDDDLNRLFGGRHAQLAASREAPRAAQLEAAAALFFSTAGRARGAR WHIDMHTAIRASVFEQFALLPHTGEPPTRTMFEWLGEAQIAAVLLHTTKGSTFSHFTAQACGALACTLELGKVMPFGAND LSRFAPADAAVRRLVSGRRDAPRGALPRAFTVVDQITKQSDALELFVANDVPNFTPFARGTLLARDGDYRYAVRHEQERI VFPNPSVKPGLRAGLLVIETTRDTHAALA >Mature_348_residues TSSADSGRDAAWLDDFLALTLAGDAPPAEAGECAARAVRWRWLGDGLLRLEPADAAQRMQSVLVSAGVHGDETAPIELLS TLVRDIARGALPLRCRLLVALGNPGAMRAGERYLDDDLNRLFGGRHAQLAASREAPRAAQLEAAAALFFSTAGRARGARW HIDMHTAIRASVFEQFALLPHTGEPPTRTMFEWLGEAQIAAVLLHTTKGSTFSHFTAQACGALACTLELGKVMPFGANDL SRFAPADAAVRRLVSGRRDAPRGALPRAFTVVDQITKQSDALELFVANDVPNFTPFARGTLLARDGDYRYAVRHEQERIV FPNPSVKPGLRAGLLVIETTRDTHAALA
Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate [H]
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788040, Length=324, Percent_Identity=47.2222222222222, Blast_Score=296, Evalue=1e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007036 - InterPro: IPR016681 [H]
Pfam domain/function: PF04952 AstE_AspA [H]
EC number: =3.5.1.96 [H]
Molecular weight: Translated: 37592; Mature: 37461
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSADSGRDAAWLDDFLALTLAGDAPPAEAGECAARAVRWRWLGDGLLRLEPADAAQRM CCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHEEEECCCEEEECCHHHHHHH QSVLVSAGVHGDETAPIELLSTLVRDIARGALPLRCRLLVALGNPGAMRAGERYLDDDLN HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH RLFGGRHAQLAASREAPRAAQLEAAAALFFSTAGRARGARWHIDMHTAIRASVFEQFALL HHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCC PHTGEPPTRTMFEWLGEAQIAAVLLHTTKGSTFSHFTAQACGALACTLELGKVMPFGAND CCCCCCCHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH LSRFAPADAAVRRLVSGRRDAPRGALPRAFTVVDQITKQSDALELFVANDVPNFTPFARG HHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC TLLARDGDYRYAVRHEQERIVFPNPSVKPGLRAGLLVIETTRDTHAALA EEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHCC >Mature Secondary Structure TSSADSGRDAAWLDDFLALTLAGDAPPAEAGECAARAVRWRWLGDGLLRLEPADAAQRM CCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHEEEECCCEEEECCHHHHHHH QSVLVSAGVHGDETAPIELLSTLVRDIARGALPLRCRLLVALGNPGAMRAGERYLDDDLN HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH RLFGGRHAQLAASREAPRAAQLEAAAALFFSTAGRARGARWHIDMHTAIRASVFEQFALL HHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCC PHTGEPPTRTMFEWLGEAQIAAVLLHTTKGSTFSHFTAQACGALACTLELGKVMPFGAND CCCCCCCHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH LSRFAPADAAVRRLVSGRRDAPRGALPRAFTVVDQITKQSDALELFVANDVPNFTPFARG HHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC TLLARDGDYRYAVRHEQERIVFPNPSVKPGLRAGLLVIETTRDTHAALA EEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA