| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813127
Identifier: 237813127
GI number: 237813127
Start: 2819678
End: 2820076
Strand: Reverse
Name: 237813127
Synonym: GBP346_A2889
Alternate gene names: NA
Gene position: 2820076-2819678 (Counterclockwise)
Preceding gene: 237813129
Following gene: 237813126
Centisome position: 68.81
GC content: 64.16
Gene sequence:
>399_bases ATGTTGCAAGCCGGACGAACGCCGAGCGCGCTTTCCGGCGAATGGCGCGCGCTGCGCACCGGTCGCGCGCCGCGTCTTTC TCCCTTCAAGGATCAGGTCATGAACGAGCAGTACGCATCCATCATCGACGTTCGTAGGATTCCTCATCACAAGCGCCATG CGCTGATCTTCGGCACCTTCGATGCGCTGCCCGGCGGCGAAGCGTTGCAACTGATCAACGATCACGATCCGAAGCCGCTC TATTACCAGCTCGAGGAGCGCGCGGCCGATTCGTTCGAATGGACGTATCTGGAAGCGGGGCCGTCGCAGTGGCGCGTGCA GATCGCCAAGCGCGGCGACGCGCTCGGGCATCATGATGCGGGCGATAGCTGCTGCTCGGGCGGCGGCTGCGGCGGTTGA
Upstream 100 bases:
>100_bases GAGTCGCATACGTGGCAAAAAGATGCATGCATTATGTTGCTATTGAGAGTGGCGCGCTATAACATGCTCGGCACATGCAC TTTATATAGTTAACGGCTGC
Downstream 100 bases:
>100_bases CGCACGCGGCGGGGCAGGACGCGGCTCGACGCCCGGGCGGGCGTCGAGCCGCATTAAAACGGCCGCCGCGGGCGCGATGA GCGCGGCATGGCAGCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MLQAGRTPSALSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG
Sequences:
>Translated_132_residues MLQAGRTPSALSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG >Mature_132_residues MLQAGRTPSALSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG
Specific function: Unknown
COG id: COG4309
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14571; Mature: 14571
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQAGRTPSALSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTF CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC DALPGGEALQLINDHDPKPLYYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDA CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC GDSCCSGGGCGG CCCCCCCCCCCC >Mature Secondary Structure MLQAGRTPSALSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTF CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC DALPGGEALQLINDHDPKPLYYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDA CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC GDSCCSGGGCGG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA