| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is sufT [H]
Identifier: 237813125
GI number: 237813125
Start: 2818837
End: 2819385
Strand: Direct
Name: sufT [H]
Synonym: GBP346_A2887
Alternate gene names: 237813125
Gene position: 2818837-2819385 (Clockwise)
Preceding gene: 237813124
Following gene: 237813128
Centisome position: 68.78
GC content: 69.76
Gene sequence:
>549_bases ATGAGACATTCGCGAGAATCCGTCGTGTTGCGGCGGCCGGTGAAGGTCGAGTGCGTGCCGTCCGGCGCGCCGCTCGAGCT GCCCGCCGGCACCGTCGCCGAGATCACGCAGGCGCTCGGCACGAACTTCACGCTCGTCGCCGGCGGCCAGATGGTGCGGC TGCGCGGCGAGGACGCCGACGCGATCGGCAAGCCGCCGCCCGAGCCGCTCGACGTGCCGGACGGCCCCGTTACGCCGGAC GGCGCGCGGGCATGCGTGATGCAGACGCTGAAGACCTGCTACGACCCGGAGATTCCGGTCGACATCGTCGAGCTCGGGCT GATCTACGGCTGCGAGATCGAGCCCGCCGGGCACGACCGCCTGAAAGTATCGATCACGATGACGTTGACCGCGCCCGGCT GCGGCATGGGAGAAGCGCTCGCCGACGAAGTGGCCGACAAGGTGCTCGCGCTGCCGTTCGTCGGCGAAGTCAACGTCGAC ATGGTGTTCGATCCGCCGTGGGACCGGTCGCGCATGTCGGAGGCGGCGATGCTGACGCTCGGCCTCTGA
Upstream 100 bases:
>100_bases ATCCGAGCCGGATCAAATGCGCGCTGCTCGGCTGGCATGCGCTCGCGCACGCGCTCGATACGCGCGTGGCCGCCCCTGGC GAAACGGAGCCGCACGCATC
Downstream 100 bases:
>100_bases CGCGGCCCGGCATGCGTTGCCCAAGCCGCTCGTGAAGCCGCCCACGCCCGCGTTCGCGGGCGTTTCGCCTGGATGAGCGC GGTCCGCGCCGATGTCGTTC
Product: probable FeS assembly SUF system protein SufT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRHSRESVVLRRPVKVECVPSGAPLELPAGTVAEITQALGTNFTLVAGGQMVRLRGEDADAIGKPPPEPLDVPDGPVTPD GARACVMQTLKTCYDPEIPVDIVELGLIYGCEIEPAGHDRLKVSITMTLTAPGCGMGEALADEVADKVLALPFVGEVNVD MVFDPPWDRSRMSEAAMLTLGL
Sequences:
>Translated_182_residues MRHSRESVVLRRPVKVECVPSGAPLELPAGTVAEITQALGTNFTLVAGGQMVRLRGEDADAIGKPPPEPLDVPDGPVTPD GARACVMQTLKTCYDPEIPVDIVELGLIYGCEIEPAGHDRLKVSITMTLTAPGCGMGEALADEVADKVLALPFVGEVNVD MVFDPPWDRSRMSEAAMLTLGL >Mature_182_residues MRHSRESVVLRRPVKVECVPSGAPLELPAGTVAEITQALGTNFTLVAGGQMVRLRGEDADAIGKPPPEPLDVPDGPVTPD GARACVMQTLKTCYDPEIPVDIVELGLIYGCEIEPAGHDRLKVSITMTLTAPGCGMGEALADEVADKVLALPFVGEVNVD MVFDPPWDRSRMSEAAMLTLGL
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 19304; Mature: 19304
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHSRESVVLRRPVKVECVPSGAPLELPAGTVAEITQALGTNFTLVAGGQMVRLRGEDAD CCCCCCCEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEEEECCCCC AIGKPPPEPLDVPDGPVTPDGARACVMQTLKTCYDPEIPVDIVELGLIYGCEIEPAGHDR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCEECCCCCCE LKVSITMTLTAPGCGMGEALADEVADKVLALPFVGEVNVDMVFDPPWDRSRMSEAAMLTL EEEEEEEEEECCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCHHHHCCEEEEEE GL CC >Mature Secondary Structure MRHSRESVVLRRPVKVECVPSGAPLELPAGTVAEITQALGTNFTLVAGGQMVRLRGEDAD CCCCCCCEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEEEECCCCC AIGKPPPEPLDVPDGPVTPDGARACVMQTLKTCYDPEIPVDIVELGLIYGCEIEPAGHDR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCEECCCCCCE LKVSITMTLTAPGCGMGEALADEVADKVLALPFVGEVNVDMVFDPPWDRSRMSEAAMLTL EEEEEEEEEECCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCHHHHCCEEEEEE GL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]