| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813118
Identifier: 237813118
GI number: 237813118
Start: 2811939
End: 2813135
Strand: Direct
Name: 237813118
Synonym: GBP346_A2881
Alternate gene names: NA
Gene position: 2811939-2813135 (Clockwise)
Preceding gene: 237813117
Following gene: 237813120
Centisome position: 68.61
GC content: 71.09
Gene sequence:
>1197_bases GTGAAGATCCCGCTCGCGACCCCACAACCGTCTCGGCAGCCCACCGGCCTGCCGGTGCTGCGGCTCGGCTTCAGACCGTT CTATCTCGGCGGCGCCTATTTCGGGATCGTCTCGATCGCGCTTTGGCTCGCATCGCTGCGCGGCCATGCGGTGGCCGGCC TGTCGCCCGCGATGAGCGGGCTCGCCTGGCACGTTCATGAAATGGTGTTCGGGTTCTCCGCCGCGATCATCGTCGGCTTC CTGCTCACGGCGATTCGCGCATGGACGTCGCGCGAGACGCCGCACGGCGCACCGCTCGCCGCGCTATGGCTGCTGTGGGC GGCCGGCCGCCTGCTCGTCTGGGCGGGACCGGAGCCGCTCGCCGCCGTGGTCGATTCCGCGTTCCTGCCGATCGCCGCGA TCCTCCTGCTGCGCGTGCTGCTCGCCGCGCGCAACCACCGCAATGTGTTCCTGACCGTCGCGCTCTTCCTGTTCGGTGCG CTCAACGCGCTCTTTCACGGGTGGGCCGCGCATGGGCGCCTCGACCTCGCGCTGCAGGCCGCCTACGCGGCGGTCGGCTT CGTCATGCTGTTCGTCGTCGTGATCGCGGGCCGCATCGTGCCGACCTTCACGATGAACGCGATTCCCGGCTTCACGGTCA AGCGCTGGAAATGGGTCGAGACGCTCGCCGCCCCGGCGACGGTGCTCGCGCTCTGCGCGGACGCGGCCCGACTGCCGGGC GCGATCGTCGCGGCCGTCGCGTTCGCCGCGGCTGCGCTGCACGCAACGCGCATCGTCGGCTGGCGTTCGTGGCGCGTCGG CGCACGGCCGATCCTGTGGATCCTGCATGTCGCGTACGCCTGGGTGCCGGTGGGCTTCGCGATGCTCGCGCTCGCCGCGC TCGACGTCGCACCCCATTCGCTCGCGATCCATGCGCTGACGGTGGGCGTGATCGGCGGCGCGATCGTCGCGATGATCACG CGCACCGCGCTCGGCCATACGGGCCGGCCGCTGCGCGCGGGGCCCGCCGAAATCGCGTGTTACTGGCTGCTGATCGCGGC CGCGCTCGTGCGCGTGTTCGCACCGTGGATCGCGCCCGATGCGACGCGCGTCTGGATCGACGTCGCGGGCGCGTGCTGGG TGGCCGCGTTCGCGGTGTATGCATTGCGTTACACCGGCTATCTGACCGCGCCGCGTATCGACGGCAAGGCCGGTTGA
Upstream 100 bases:
>100_bases CCGAAGCGCAATCGCACCGCGCCGGCGCGCACGAGCATTGGACCCGCCTCGCTTCACGCATTAAGATACATAATAAATGC ATCTTAACTGGAGAGCCAAT
Downstream 100 bases:
>100_bases CCTGCCCGCGCGGCGTTCGAACGCGCCGCCGCGCCGCGGGCGACGTGCGATGCGGCGGCAGCCGCTACTGCCGCGACCGC GGTGCGAAGCATGCCGGCAC
Product: heme/copper membrane protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Heme-Cu Protein NnrS; Protein Involved In Response NO; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; NnrS Protein Superfamily; Asparagine Synthetase
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKIPLATPQPSRQPTGLPVLRLGFRPFYLGGAYFGIVSIALWLASLRGHAVAGLSPAMSGLAWHVHEMVFGFSAAIIVGF LLTAIRAWTSRETPHGAPLAALWLLWAAGRLLVWAGPEPLAAVVDSAFLPIAAILLLRVLLAARNHRNVFLTVALFLFGA LNALFHGWAAHGRLDLALQAAYAAVGFVMLFVVVIAGRIVPTFTMNAIPGFTVKRWKWVETLAAPATVLALCADAARLPG AIVAAVAFAAAALHATRIVGWRSWRVGARPILWILHVAYAWVPVGFAMLALAALDVAPHSLAIHALTVGVIGGAIVAMIT RTALGHTGRPLRAGPAEIACYWLLIAAALVRVFAPWIAPDATRVWIDVAGACWVAAFAVYALRYTGYLTAPRIDGKAG
Sequences:
>Translated_398_residues MKIPLATPQPSRQPTGLPVLRLGFRPFYLGGAYFGIVSIALWLASLRGHAVAGLSPAMSGLAWHVHEMVFGFSAAIIVGF LLTAIRAWTSRETPHGAPLAALWLLWAAGRLLVWAGPEPLAAVVDSAFLPIAAILLLRVLLAARNHRNVFLTVALFLFGA LNALFHGWAAHGRLDLALQAAYAAVGFVMLFVVVIAGRIVPTFTMNAIPGFTVKRWKWVETLAAPATVLALCADAARLPG AIVAAVAFAAAALHATRIVGWRSWRVGARPILWILHVAYAWVPVGFAMLALAALDVAPHSLAIHALTVGVIGGAIVAMIT RTALGHTGRPLRAGPAEIACYWLLIAAALVRVFAPWIAPDATRVWIDVAGACWVAAFAVYALRYTGYLTAPRIDGKAG >Mature_398_residues MKIPLATPQPSRQPTGLPVLRLGFRPFYLGGAYFGIVSIALWLASLRGHAVAGLSPAMSGLAWHVHEMVFGFSAAIIVGF LLTAIRAWTSRETPHGAPLAALWLLWAAGRLLVWAGPEPLAAVVDSAFLPIAAILLLRVLLAARNHRNVFLTVALFLFGA LNALFHGWAAHGRLDLALQAAYAAVGFVMLFVVVIAGRIVPTFTMNAIPGFTVKRWKWVETLAAPATVLALCADAARLPG AIVAAVAFAAAALHATRIVGWRSWRVGARPILWILHVAYAWVPVGFAMLALAALDVAPHSLAIHALTVGVIGGAIVAMIT RTALGHTGRPLRAGPAEIACYWLLIAAALVRVFAPWIAPDATRVWIDVAGACWVAAFAVYALRYTGYLTAPRIDGKAG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42254; Mature: 42254
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPLATPQPSRQPTGLPVLRLGFRPFYLGGAYFGIVSIALWLASLRGHAVAGLSPAMSG CCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LAWHVHEMVFGFSAAIIVGFLLTAIRAWTSRETPHGAPLAALWLLWAAGRLLVWAGPEPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCHH AAVVDSAFLPIAAILLLRVLLAARNHRNVFLTVALFLFGALNALFHGWAAHGRLDLALQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AYAAVGFVMLFVVVIAGRIVPTFTMNAIPGFTVKRWKWVETLAAPATVLALCADAARLPG HHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH AIVAAVAFAAAALHATRIVGWRSWRVGARPILWILHVAYAWVPVGFAMLALAALDVAPHS HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LAIHALTVGVIGGAIVAMITRTALGHTGRPLRAGPAEIACYWLLIAAALVRVFAPWIAPD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ATRVWIDVAGACWVAAFAVYALRYTGYLTAPRIDGKAG CCEEHEEHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC >Mature Secondary Structure MKIPLATPQPSRQPTGLPVLRLGFRPFYLGGAYFGIVSIALWLASLRGHAVAGLSPAMSG CCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LAWHVHEMVFGFSAAIIVGFLLTAIRAWTSRETPHGAPLAALWLLWAAGRLLVWAGPEPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCHH AAVVDSAFLPIAAILLLRVLLAARNHRNVFLTVALFLFGALNALFHGWAAHGRLDLALQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AYAAVGFVMLFVVVIAGRIVPTFTMNAIPGFTVKRWKWVETLAAPATVLALCADAARLPG HHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH AIVAAVAFAAAALHATRIVGWRSWRVGARPILWILHVAYAWVPVGFAMLALAALDVAPHS HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LAIHALTVGVIGGAIVAMITRTALGHTGRPLRAGPAEIACYWLLIAAALVRVFAPWIAPD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ATRVWIDVAGACWVAAFAVYALRYTGYLTAPRIDGKAG CCEEHEEHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA