| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813113
Identifier: 237813113
GI number: 237813113
Start: 2807182
End: 2807874
Strand: Reverse
Name: 237813113
Synonym: GBP346_A2874
Alternate gene names: NA
Gene position: 2807874-2807182 (Counterclockwise)
Preceding gene: 237813114
Following gene: 237813111
Centisome position: 68.51
GC content: 64.79
Gene sequence:
>693_bases GTGATGAAGGAAAGCAAGATTCCCGTGCAGGATTTTCTTGCGCGGCTGCCGCTTTTCAGCGTGCTGTCGCGCGGCGAGCT CGACAATCTCGCGCGCGGCACGATGCGCGTGCAGGTGCCGCGCGGGCAGACGGTGTTCAGCCGGGGCGATCCGTGCGGCG GTTTTCACATGATCGTCTACGGCCAGATCAAGCTGAGCTCGTTCTCGCCGCTCGGCATCGAGAAGATCGTGCGCCTGCTC GGGCCGGGCGACAGCTTCGGCGAAGCGGTGATGTTCATGGACAAGCCGTACGCGGTGACGGCGAAGGCGCTCTCCGACAC GCTGCTGCTGCACGTGACGAAAGCCGTCGTGACCGAGGAGCTCGATCACAACCCGGCGTTCGCGCGCCGAATGCTCGCGA GCCTCAGCATGCGGCTGCATCAGCTCGTCGTCGACGTCGAGACGTATTCGCTGCGCTCGGGCACGCAGCGCGTGATCAGC TATCTGCTCGAGCAGACCGACGCGCCCGTGGAATCCGGCATGCAGATCCGGCTCGAGACGGGCAAGAAGGCGATCGCGTC GCGGCTGAACCTCACGCCCGAGCACTTCTCGCGCGTGCTGCGCGATCTCTGCACGCGCGAGCTCGTCGTCGTCAATGGCC GCGACATCTTCATTCCCGACGTCGACCGGTTACGCTTGGAGATGCAGTACTGA
Upstream 100 bases:
>100_bases CGAAGGGGCGCATGTTCGTGCGCGCGATCGGCATGGTGTTCGACGCGTATCTCGGCCGCAGCGCCGCGGCGTCTTATTCG AAATTGATCTAGAAGGTGGC
Downstream 100 bases:
>100_bases CGTGACGCGCCGCCGAACGCGCGCATAGCGCCGCCAGGCGCCGAACATGTTGAGCGCGAGCCAGCCGGCCGACACGCCGA GCGCGACGGCGGCCGGCCGC
Product: cyclic nucleotide-binding domain protein
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcription Regulator; Catabolite Gene Activator; Cyclic AMP Receptor Protein; Nitrite And Nitric Oxide Reductase Regulator; Regulator Of Biofilm Formation Fnr Family; Regulatory Protein; CAMP-Dependent Transcriptional Regulator; Transcription Regulator Protein Crp/Fnr Family; Transcriptional Activator FtrB; Transcriptional Regulator Dnr; Transcriptional Regulator DnrS; Crp-Family Transcriptional Regulator; Transcriptional Regulator Dnr Type; Transcriptional Activator; FNR Like Protein A; Transcriptional Regulatory Protein; DnrE Protein; Crp-Like Transcriptional Regulator; Fnr-Like Transcriptional Activator; Crp Family Regulatory Protein; DNR Protein; Transcription Regulator Protein; Transcriptional Regulator Dnr-Type; Denitrification Transcriptional Regulator Protein; FNR-Like Transcriptional Regulator; CAMP-Bindin Transcriptional Regulator; Flp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Dnr/Nnr Type
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MMKESKIPVQDFLARLPLFSVLSRGELDNLARGTMRVQVPRGQTVFSRGDPCGGFHMIVYGQIKLSSFSPLGIEKIVRLL GPGDSFGEAVMFMDKPYAVTAKALSDTLLLHVTKAVVTEELDHNPAFARRMLASLSMRLHQLVVDVETYSLRSGTQRVIS YLLEQTDAPVESGMQIRLETGKKAIASRLNLTPEHFSRVLRDLCTRELVVVNGRDIFIPDVDRLRLEMQY
Sequences:
>Translated_230_residues MMKESKIPVQDFLARLPLFSVLSRGELDNLARGTMRVQVPRGQTVFSRGDPCGGFHMIVYGQIKLSSFSPLGIEKIVRLL GPGDSFGEAVMFMDKPYAVTAKALSDTLLLHVTKAVVTEELDHNPAFARRMLASLSMRLHQLVVDVETYSLRSGTQRVIS YLLEQTDAPVESGMQIRLETGKKAIASRLNLTPEHFSRVLRDLCTRELVVVNGRDIFIPDVDRLRLEMQY >Mature_230_residues MMKESKIPVQDFLARLPLFSVLSRGELDNLARGTMRVQVPRGQTVFSRGDPCGGFHMIVYGQIKLSSFSPLGIEKIVRLL GPGDSFGEAVMFMDKPYAVTAKALSDTLLLHVTKAVVTEELDHNPAFARRMLASLSMRLHQLVVDVETYSLRSGTQRVIS YLLEQTDAPVESGMQIRLETGKKAIASRLNLTPEHFSRVLRDLCTRELVVVNGRDIFIPDVDRLRLEMQY
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25821; Mature: 25821
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKESKIPVQDFLARLPLFSVLSRGELDNLARGTMRVQVPRGQTVFSRGDPCGGFHMIVY CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCEEECCCCCCCCEEEEEE GQIKLSSFSPLGIEKIVRLLGPGDSFGEAVMFMDKPYAVTAKALSDTLLLHVTKAVVTEE EEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHH LDHNPAFARRMLASLSMRLHQLVVDVETYSLRSGTQRVISYLLEQTDAPVESGMQIRLET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEC GKKAIASRLNLTPEHFSRVLRDLCTRELVVVNGRDIFIPDVDRLRLEMQY CHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCEEECCCHHHEEEEECC >Mature Secondary Structure MMKESKIPVQDFLARLPLFSVLSRGELDNLARGTMRVQVPRGQTVFSRGDPCGGFHMIVY CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCEEECCCCCCCCEEEEEE GQIKLSSFSPLGIEKIVRLLGPGDSFGEAVMFMDKPYAVTAKALSDTLLLHVTKAVVTEE EEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHH LDHNPAFARRMLASLSMRLHQLVVDVETYSLRSGTQRVISYLLEQTDAPVESGMQIRLET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEC GKKAIASRLNLTPEHFSRVLRDLCTRELVVVNGRDIFIPDVDRLRLEMQY CHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCEEECCCHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA