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The map label for this gene is alkB [H]

Identifier: 237813095

GI number: 237813095

Start: 2790613

End: 2791779

Strand: Direct

Name: alkB [H]

Synonym: GBP346_A2857

Alternate gene names: 237813095

Gene position: 2790613-2791779 (Clockwise)

Preceding gene: 237813085

Following gene: 237813097

Centisome position: 68.09

GC content: 67.1

Gene sequence:

>1167_bases
ATGGCAATCCAGCAACCGGTGTCGGCCAACTGGACCGACACGAAACGCTATTGGTGGCTGCTCGGCGCACTGACGATCAC
GCTGCCGCTCGTCGCCGCGCTCCTCGCGCTGTCGACCGGCTGGCACGTGTTCTGGTGGTTCGGGCCGCTCTTCGCGTTCG
GCGTCATCCCGGTGCTCGACCTGCTGATCGGCGTCGACAGCGAGAATCCGCCCGAATCGATCGTACCCCGGCTCGAAAGC
GAACGCTACTACCGCTACGTCGTCTATCTGGCGACCTTCGTCGTCTATGTCGCCTTCGCGGGCGCGATCTGGATCGTCGC
CACGCAGCCGCTCGCGTGGTACGACTACCTCGGCTTCGCGTTCTCGCTCGGCGCGGCCACCGGCATCTCGATCAACACCG
CGCACGAGCTCGGCCACAAGACGAGCCCGCTCGAGCGCTGGCTCGCGAAGATCACGCTCGCGCCCGTCGCGTACGGCCAC
TTCTTCGTCGAGCACAATCGCGGGCACCACGTGCGCGTGGCGACGCCGGACGATCCCGCGAGCGCGCGCTACGGCGAATC
GTTCTGGGCGTTCCTGCCGCGCACCGTGACGGGCAGCATCGCGTCCGCATGGCGGCTCGAGAAGGCGCGCCTCGCGCGCA
GCGGCCGCTCGGCGTGGTCGTGGCGCAACGAGGTGCTGCAGGCGTGGGCGATGACGGTCGCGCTATGGAGCGCCGCGATC
GCGTTCGGCGGCGCGAAGGTGGTGCCGTTCCTGCTGATCCAGGCGGCATACGGCGCGTCGCTGCTCGAGGTCGTGAACTA
TGTCGAGCATTACGGGCTCGGCCGCAGGCAGTTGCCGACCGGACGCTACGAGCGCTGCACGCCGCAGCACTCGTGGAATA
GCAACCACGTCGTGACGAATCTGTTCCTCTATCAGTTGCAACGCCACGCCGATCATCATGCGAATCCGACGCGCTCGTAT
CAGGCGCTGCGGCACTTCGACGATTCGCCGCAACTGCCGGCCGGCTACGCGGCGATGATCCTGCTCGCGTACGTGCCGCC
GCTGTGGTTCAGGGTGATGAATCCGCGGGTCGTCGCGCACTACGGTGCGGACATGGCGCAATCGAACATCAAGCCGTCGA
TCCGGCAAAAGGTGCTCGCGGAGCTCGCCATCGCGAACGCGCCGTGA

Upstream 100 bases:

>100_bases
TCAGCGCAACGGGCACGAACCCGTCGGCGCGAACAACGCATCGCTCGCGCACGCCGCCGGTCGGAGCAGAACAAATCGGT
ACCCAACTTGGAGGGAGACA

Downstream 100 bases:

>100_bases
TTCGGCGACGCCGCGCTTGCAGGCGCCGAATCACGGCGGCCGCAAGCGCGGCGCGCGGCCGCGGCGAACCGACGTGCGCG
GCTGCCGCGCTTTCACCGAG

Product: alkane 1-monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MAIQQPVSANWTDTKRYWWLLGALTITLPLVAALLALSTGWHVFWWFGPLFAFGVIPVLDLLIGVDSENPPESIVPRLES
ERYYRYVVYLATFVVYVAFAGAIWIVATQPLAWYDYLGFAFSLGAATGISINTAHELGHKTSPLERWLAKITLAPVAYGH
FFVEHNRGHHVRVATPDDPASARYGESFWAFLPRTVTGSIASAWRLEKARLARSGRSAWSWRNEVLQAWAMTVALWSAAI
AFGGAKVVPFLLIQAAYGASLLEVVNYVEHYGLGRRQLPTGRYERCTPQHSWNSNHVVTNLFLYQLQRHADHHANPTRSY
QALRHFDDSPQLPAGYAAMILLAYVPPLWFRVMNPRVVAHYGADMAQSNIKPSIRQKVLAELAIANAP

Sequences:

>Translated_388_residues
MAIQQPVSANWTDTKRYWWLLGALTITLPLVAALLALSTGWHVFWWFGPLFAFGVIPVLDLLIGVDSENPPESIVPRLES
ERYYRYVVYLATFVVYVAFAGAIWIVATQPLAWYDYLGFAFSLGAATGISINTAHELGHKTSPLERWLAKITLAPVAYGH
FFVEHNRGHHVRVATPDDPASARYGESFWAFLPRTVTGSIASAWRLEKARLARSGRSAWSWRNEVLQAWAMTVALWSAAI
AFGGAKVVPFLLIQAAYGASLLEVVNYVEHYGLGRRQLPTGRYERCTPQHSWNSNHVVTNLFLYQLQRHADHHANPTRSY
QALRHFDDSPQLPAGYAAMILLAYVPPLWFRVMNPRVVAHYGADMAQSNIKPSIRQKVLAELAIANAP
>Mature_387_residues
AIQQPVSANWTDTKRYWWLLGALTITLPLVAALLALSTGWHVFWWFGPLFAFGVIPVLDLLIGVDSENPPESIVPRLESE
RYYRYVVYLATFVVYVAFAGAIWIVATQPLAWYDYLGFAFSLGAATGISINTAHELGHKTSPLERWLAKITLAPVAYGHF
FVEHNRGHHVRVATPDDPASARYGESFWAFLPRTVTGSIASAWRLEKARLARSGRSAWSWRNEVLQAWAMTVALWSAAIA
FGGAKVVPFLLIQAAYGASLLEVVNYVEHYGLGRRQLPTGRYERCTPQHSWNSNHVVTNLFLYQLQRHADHHANPTRSYQ
ALRHFDDSPQLPAGYAAMILLAYVPPLWFRVMNPRVVAHYGADMAQSNIKPSIRQKVLAELAIANAP

Specific function: Catalyzes the hydroxylation of n-alkanes and fatty acids in the presence of a NADH-rubredoxin reductase and rubredoxin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 43538; Mature: 43407

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQQPVSANWTDTKRYWWLLGALTITLPLVAALLALSTGWHVFWWFGPLFAFGVIPVLD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLIGVDSENPPESIVPRLESERYYRYVVYLATFVVYVAFAGAIWIVATQPLAWYDYLGFA
HHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
FSLGAATGISINTAHELGHKTSPLERWLAKITLAPVAYGHFFVEHNRGHHVRVATPDDPA
HHHCCCCCCEEECHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCC
SARYGESFWAFLPRTVTGSIASAWRLEKARLARSGRSAWSWRNEVLQAWAMTVALWSAAI
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFGGAKVVPFLLIQAAYGASLLEVVNYVEHYGLGRRQLPTGRYERCTPQHSWNSNHVVTN
HHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFLYQLQRHADHHANPTRSYQALRHFDDSPQLPAGYAAMILLAYVPPLWFRVMNPRVVAH
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEC
YGADMAQSNIKPSIRQKVLAELAIANAP
CCCHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIQQPVSANWTDTKRYWWLLGALTITLPLVAALLALSTGWHVFWWFGPLFAFGVIPVLD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLIGVDSENPPESIVPRLESERYYRYVVYLATFVVYVAFAGAIWIVATQPLAWYDYLGFA
HHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
FSLGAATGISINTAHELGHKTSPLERWLAKITLAPVAYGHFFVEHNRGHHVRVATPDDPA
HHHCCCCCCEEECHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCC
SARYGESFWAFLPRTVTGSIASAWRLEKARLARSGRSAWSWRNEVLQAWAMTVALWSAAI
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFGGAKVVPFLLIQAAYGASLLEVVNYVEHYGLGRRQLPTGRYERCTPQHSWNSNHVVTN
HHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFLYQLQRHADHHANPTRSYQALRHFDDSPQLPAGYAAMILLAYVPPLWFRVMNPRVVAH
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEC
YGADMAQSNIKPSIRQKVLAELAIANAP
CCCHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2647718; 1315749; 9096332; 12804773 [H]