| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813000
Identifier: 237813000
GI number: 237813000
Start: 2687382
End: 2688209
Strand: Reverse
Name: 237813000
Synonym: GBP346_A2759
Alternate gene names: NA
Gene position: 2688209-2687382 (Counterclockwise)
Preceding gene: 237813001
Following gene: 237812998
Centisome position: 65.59
GC content: 69.44
Gene sequence:
>828_bases TTGAAGGACATCATCCATTTCTCGCATGCGAACGGCTTTCCGGCGTCCACGTATCGGACGATCTTCGCCGAACTCGCGGA CGATTACGAACTGCGCTTCATCGAGCGGATCGGCCATGACCGCCGCTTTCCGGTGACGCGCGACTGGCCGCACCTCGTCG AGCAACTGCTCGACGACATCGGTCGCGCGTACGAGCGGCCCGTGTGGCTCGTCGGCCATTCGCTCGGCGGCTATCTGTCG CTGATGGCGGCGCTCAAGCGCCCGCAATGGGTGCGCGGCGTCGTGATGCTCGATTCGCCCGTGATCGCCGGCTGGCGCAG CAGCGCGCTGCGCGTGAGCCAATGGACGGGGCTCGACGAGCGCCTGTCTCCCGCCGCGGCGACCCGCACCCGGCGCGTCC ATTGGGCGAGCCGCGACGACGCGTGGCGGCATTTCCGCGCGAAGCCCGCGTTCGCGCGCTGGGACGAGCGGATGCTGTCC GATTACATCGACTACGGCATTCCGCAGACGAGTGCGGCGGGCGAGCGCACGCTCGCATTCGATCGGCAGATCGAATACAT GATCTACCGGACATTGCCGCACACGCTCGGCCCGCGTCTTGCGCACGGCGCGCCCGTGCCGGTCGGCTTTCTCGCCGGCA CGCGCTCGCGCGAGATCCGCCAGATCGGGCTCGCGGCGACGCGCCGGGCCGTGCGCGGCAGGATCGAATGGCTCGAGGGC AGCCACCTCTTTCCGATGGAGCGGCCGCTCGAGACCGCGCGTGCGCTGCAGCGCATGATCAACATGCTGCGCGAGGCGCA AGGCGGCGCCGGCGCGCGGCGCGGATGA
Upstream 100 bases:
>100_bases CGGCGCGCTTGCCGAGCCGGTGCGGTATCGGGACGCGCACCGGCGCTACTGGATGGGCCGTTGACGCGATGCGGAGGCTA CGACAGGGAGACAGCGTCGT
Downstream 100 bases:
>100_bases GCACGCCGGCGCGCGCCGCGCTGCTCGGTGCGGCTCGGCGAGGTGCGGGAACAGCTGGACGCGGCCGTCGCGCAAGCCGG GCGGCGCGACGGATTTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolases Or Acyltransferases; Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Family; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDIGRAYERPVWLVGHSLGGYLS LMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDERLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLS DYIDYGIPQTSAAGERTLAFDRQIEYMIYRTLPHTLGPRLAHGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG SHLFPMERPLETARALQRMINMLREAQGGAGARRG
Sequences:
>Translated_275_residues MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDIGRAYERPVWLVGHSLGGYLS LMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDERLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLS DYIDYGIPQTSAAGERTLAFDRQIEYMIYRTLPHTLGPRLAHGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG SHLFPMERPLETARALQRMINMLREAQGGAGARRG >Mature_275_residues MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDIGRAYERPVWLVGHSLGGYLS LMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDERLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLS DYIDYGIPQTSAAGERTLAFDRQIEYMIYRTLPHTLGPRLAHGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG SHLFPMERPLETARALQRMINMLREAQGGAGARRG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31506; Mature: 31506
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDI CCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRAYERPVWLVGHSLGGYLSLMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDE HHHHCCCEEEEECCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCEEHHHHCCCHH RLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLSDYIDYGIPQTSAAGERTLAF HCCCHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DRQIEYMIYRTLPHTLGPRLAHGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG HHHHHHHHHHHCCHHHCCHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SHLFPMERPLETARALQRMINMLREAQGGAGARRG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDI CCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRAYERPVWLVGHSLGGYLSLMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDE HHHHCCCEEEEECCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCEEHHHHCCCHH RLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLSDYIDYGIPQTSAAGERTLAF HCCCHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DRQIEYMIYRTLPHTLGPRLAHGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG HHHHHHHHHHHCCHHHCCHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SHLFPMERPLETARALQRMINMLREAQGGAGARRG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA