| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812978
Identifier: 237812978
GI number: 237812978
Start: 2667313
End: 2668611
Strand: Direct
Name: 237812978
Synonym: GBP346_A2739
Alternate gene names: NA
Gene position: 2667313-2668611 (Clockwise)
Preceding gene: 237812977
Following gene: 237812980
Centisome position: 65.08
GC content: 68.67
Gene sequence:
>1299_bases ATGCGCAACGCTGACGGCACCGCGCCGCGCGCGCCGCTTCCCTCGCGCATCGCCGCGTCCGCGCTCGCCTGCATACTTGC AGCGGCGCTCGCCGGCAACGCACGGGCCGCACCTGCGTCGCCGCGAACGGGCGGCGATCCGTACGCGTTCGCGGTCTTGT CCGGCGTGATCGCATCGGCCGACGACGAACCGCAGGCCCGGCGCCTGCTCGATGCGATCGCGCGCGATCGCTCGGTGTCG TTCATCGTCTACGAAGGCAACCTGAAGGGGCCGAAGGAAGCCTGCCGCGATCAGCTATACGAGCAACGCAACGTGCTGTT CGCGACGTCCCGCGTCCCGCTCGTGCTACTGCCGGGCCAGTACGACTGGGCCGCCTGCGGTACGCGCGACGCCGGTGCGT ACGACCCCGTCGAGCGGCTCGACTTCCTGCGTCAGAACGTCTTTACCGAGCCGGCGTCGCCCGGCGCGAATCCGCTGCCG CTCACGCGCGAAAGCGAAGTGGCACGCTTTCACCCCTATCGCGAAAACGTTCGCTGGATTCGCGACGATACGGTGTTCAT CGGCTTGAACGCACCCGCGCCGAACAACCGCTATCTGACGGCGGGCGGGCGCAACGGCGAGTTCGAGGATCGCGCCATCG CAAACGCATTCTGGATCGATCACGCGGCCGAATACGCGAAGCGCCGCAAGGCGCGCGCGCTCGTGGTGTTTCTCGAGGGC GACCCGCAATTCGATCGCTACGAACGTTCGGAGCGCTTCGGCTGGCTGCGCTTCAACCGCCCTCGCGTACGCGACGGCTT TCGCGAATTCAAGCGAGCGCTGGTGAAGGCCGCGGCGGTCTTTCGCGGCTCGATCGTCGTCGTGCACCCGAGTGGCGAAC CGCTCGCGGACGGTTTCAGGATCGACCGCCCGTTACGCGACGACAAGGGGGAGTTGGTCGGCAATCTGACGCGCGTCGCG ATCGCGCCGCATGCGCGCTTGACGCACTGGGTGCGAATCGGCGTGGATGCGGCGAAGCAGCCGATGTTCAACGTGAGCAT GCAGACCGTGCCGAAGTATTTGCCTCAGCCGCCCGCGCTGCCCGTCGTGCCGCATGACGACACGCCGCTGCCCGACATGC CCGAGATCCCGGCGCAGCCGGTGCTGCCCGATTCGGGTGCGAGCGGCGCGGCGCCGCCCGGCTATGGTGGATGGCACGGC GCGCATGAAGGTTCATTCGATCACCGCGCGCCATCGGGCGCGACGCCCGGCGACGCGCCGGACATCGCCGTGCCCGGCTC AATGCAGGGTACGCGCTGA
Upstream 100 bases:
>100_bases CTCGAGCGCCTGCTCGAGCTCGATCCGGACGACTTGAAACCGCGCGACGCGCTCGATCTGCTCTACGAACTTCACACACT CGCCCGCTCGGGCCCGGCGG
Downstream 100 bases:
>100_bases CCCGTTACCTTCGTTGTCGTCGTCCTCGTCCTCATCGACGATTTCGAGCCCTTCCGCGCCATGCGCATGTTCGTGCTCGA TCTCGTCTTCCGTCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRNADGTAPRAPLPSRIAASALACILAAALAGNARAAPASPRTGGDPYAFAVLSGVIASADDEPQARRLLDAIARDRSVS FIVYEGNLKGPKEACRDQLYEQRNVLFATSRVPLVLLPGQYDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPLP LTRESEVARFHPYRENVRWIRDDTVFIGLNAPAPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLADGFRIDRPLRDDKGELVGNLTRVA IAPHARLTHWVRIGVDAAKQPMFNVSMQTVPKYLPQPPALPVVPHDDTPLPDMPEIPAQPVLPDSGASGAAPPGYGGWHG AHEGSFDHRAPSGATPGDAPDIAVPGSMQGTR
Sequences:
>Translated_432_residues MRNADGTAPRAPLPSRIAASALACILAAALAGNARAAPASPRTGGDPYAFAVLSGVIASADDEPQARRLLDAIARDRSVS FIVYEGNLKGPKEACRDQLYEQRNVLFATSRVPLVLLPGQYDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPLP LTRESEVARFHPYRENVRWIRDDTVFIGLNAPAPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLADGFRIDRPLRDDKGELVGNLTRVA IAPHARLTHWVRIGVDAAKQPMFNVSMQTVPKYLPQPPALPVVPHDDTPLPDMPEIPAQPVLPDSGASGAAPPGYGGWHG AHEGSFDHRAPSGATPGDAPDIAVPGSMQGTR >Mature_432_residues MRNADGTAPRAPLPSRIAASALACILAAALAGNARAAPASPRTGGDPYAFAVLSGVIASADDEPQARRLLDAIARDRSVS FIVYEGNLKGPKEACRDQLYEQRNVLFATSRVPLVLLPGQYDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPLP LTRESEVARFHPYRENVRWIRDDTVFIGLNAPAPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLADGFRIDRPLRDDKGELVGNLTRVA IAPHARLTHWVRIGVDAAKQPMFNVSMQTVPKYLPQPPALPVVPHDDTPLPDMPEIPAQPVLPDSGASGAAPPGYGGWHG AHEGSFDHRAPSGATPGDAPDIAVPGSMQGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47051; Mature: 47051
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNADGTAPRAPLPSRIAASALACILAAALAGNARAAPASPRTGGDPYAFAVLSGVIASA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC DDEPQARRLLDAIARDRSVSFIVYEGNLKGPKEACRDQLYEQRNVLFATSRVPLVLLPGQ CCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCC YDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPLPLTRESEVARFHPYRENVRWI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCEEE RDDTVFIGLNAPAPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG ECCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLADGFR CCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEE IDRPLRDDKGELVGNLTRVAIAPHARLTHWVRIGVDAAKQPMFNVSMQTVPKYLPQPPAL CCCCCCCCCHHHHHHHEEEEECCCHHHHEEEEECCCHHCCCHHCCHHHHHHHHCCCCCCC PVVPHDDTPLPDMPEIPAQPVLPDSGASGAAPPGYGGWHGAHEGSFDHRAPSGATPGDAP EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DIAVPGSMQGTR CEECCCCCCCCC >Mature Secondary Structure MRNADGTAPRAPLPSRIAASALACILAAALAGNARAAPASPRTGGDPYAFAVLSGVIASA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC DDEPQARRLLDAIARDRSVSFIVYEGNLKGPKEACRDQLYEQRNVLFATSRVPLVLLPGQ CCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCC YDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPLPLTRESEVARFHPYRENVRWI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCEEE RDDTVFIGLNAPAPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG ECCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLADGFR CCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEE IDRPLRDDKGELVGNLTRVAIAPHARLTHWVRIGVDAAKQPMFNVSMQTVPKYLPQPPAL CCCCCCCCCHHHHHHHEEEEECCCHHHHEEEEECCCHHCCCHHCCHHHHHHHHCCCCCCC PVVPHDDTPLPDMPEIPAQPVLPDSGASGAAPPGYGGWHGAHEGSFDHRAPSGATPGDAP EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DIAVPGSMQGTR CEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA