| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812972
Identifier: 237812972
GI number: 237812972
Start: 2660738
End: 2662054
Strand: Direct
Name: 237812972
Synonym: GBP346_A2732
Alternate gene names: NA
Gene position: 2660738-2662054 (Clockwise)
Preceding gene: 237812971
Following gene: 237812974
Centisome position: 64.92
GC content: 63.86
Gene sequence:
>1317_bases ATGGACGCCCGCACCCAACCGCTCGCGCTCGTCGAGCCAATCGTCACCGGCAATGCGAAGGCCGCCGCTGCGGCGGCGGG CGCGACGTCGGCGGATCTCTGGATGGTGCCGTACGAACAGCTCCACTACGATCCACGCGACAACGTGCGCCCCGTCGATC AACAGTGGGTGTCGCACCTCACCGCGCTGATGATCGCCAACGGCTACGACAAGAGTCAACCGCTCCATTGCTACGTCCGG AAAGTCGACGGAAAGGACCTGATCTACGTCTACAAGGGGCAACACCGCTACCTCTCCGCTGGCAACGCAATCCGTGCGGG AAAGGACCTCGGCAAGATCCCGGTCGTCGTGCGCGATGCGAAGACGGTTGAACGCGCCGAGATGGTGATCGACGGCTACG TTAGCAACGAAAGCAAGCGCGCGTCTCCGCTCGACCTCGCGACGGTCGTCGCGGAACTGCGCGACGTACATGGCCTCGAC ACGAAAACGATCTGCAAGCGCCTGAACGTTACGGACCAAACCATTCGCGACGTCGGCCTGCTCGAGCAGGCACCTGCGGA GATTCACCAGTTCGTCCGCGACGGCTCCATCTCCGGCACGCTCGTGATCGAGCAGATACGACGGCACGGCGCGGAACGGA CGCTGGAGCGGATCGTCTCGAGCCTGTCGAAAGCGAAAGACGCGGGCAAGACGAAGGTCACGAAAAAGCATCTCCACACG GCGTCGCCCAAGAGCGTCGCGGCAACGGCCGCCGCCGAGCCTCAACGGAAGATTGGCGAGCAACATGCAAAGCAACTTTT GCAAGCGCTGCAAAGCGTGTTGCACGATCCGGGCTTCGGCAAGTTGTCGCCGGGCACGATCGCAGGCGTACATCGCGCGT TGACGGGCTTCGAAGACCTGCTCGATACCGTGCCGACGCGTCGGCCGAAGTATCCGATCGCCAAGGCAAACGAGCATGGC GTGTATGAGCCATCGGAAATCCTGTCCGCGCCCATCTCGAAGCGCACCGGGCGCGCGTCCGTCGAGATTCGGCTCGCGCA GATCGCAGAGGGCGATTGGGAGTTCGGTTTCTCGTACGCCTTCAACAGCGCGGGCGGATCGTCGCCATGCAAGCGCATCG ACGGCGAATCCCCCGGCCGGTACAGGACGCGCGTCGAAGCGATCCGGGCTGCGGTTCAGGTGCTCACCCGCACCCTCGAA AGCACTAGCGCTTCGAAGGCGAAGGAAATGGCAGGCGTTCGGCGGTGGCTCGACAAGCTGTTCACGATGCCCGACCCCGA CTGGACGCCCGAAATGGCGCGGGAGGCAGCCCAATGA
Upstream 100 bases:
>100_bases GGTCGAATCTCCTGCTTCGGCGACCGAAAACGCAGTCGCGCCTGATCCTCGACTGCTCAATGGAACTCGCTCACAGTCTC CGACCGCAGGAGGCCGGGTA
Downstream 100 bases:
>100_bases CCCCGCGCCCGGCCCTTTCTACCCCACGTCCGCTGCCGCGAAAGCGGGAACGCGCGAACAAGCGCCCGGCTATCACACTG GCGAGCGTCGACGGCAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MDARTQPLALVEPIVTGNAKAAAAAAGATSADLWMVPYEQLHYDPRDNVRPVDQQWVSHLTALMIANGYDKSQPLHCYVR KVDGKDLIYVYKGQHRYLSAGNAIRAGKDLGKIPVVVRDAKTVERAEMVIDGYVSNESKRASPLDLATVVAELRDVHGLD TKTICKRLNVTDQTIRDVGLLEQAPAEIHQFVRDGSISGTLVIEQIRRHGAERTLERIVSSLSKAKDAGKTKVTKKHLHT ASPKSVAATAAAEPQRKIGEQHAKQLLQALQSVLHDPGFGKLSPGTIAGVHRALTGFEDLLDTVPTRRPKYPIAKANEHG VYEPSEILSAPISKRTGRASVEIRLAQIAEGDWEFGFSYAFNSAGGSSPCKRIDGESPGRYRTRVEAIRAAVQVLTRTLE STSASKAKEMAGVRRWLDKLFTMPDPDWTPEMAREAAQ
Sequences:
>Translated_438_residues MDARTQPLALVEPIVTGNAKAAAAAAGATSADLWMVPYEQLHYDPRDNVRPVDQQWVSHLTALMIANGYDKSQPLHCYVR KVDGKDLIYVYKGQHRYLSAGNAIRAGKDLGKIPVVVRDAKTVERAEMVIDGYVSNESKRASPLDLATVVAELRDVHGLD TKTICKRLNVTDQTIRDVGLLEQAPAEIHQFVRDGSISGTLVIEQIRRHGAERTLERIVSSLSKAKDAGKTKVTKKHLHT ASPKSVAATAAAEPQRKIGEQHAKQLLQALQSVLHDPGFGKLSPGTIAGVHRALTGFEDLLDTVPTRRPKYPIAKANEHG VYEPSEILSAPISKRTGRASVEIRLAQIAEGDWEFGFSYAFNSAGGSSPCKRIDGESPGRYRTRVEAIRAAVQVLTRTLE STSASKAKEMAGVRRWLDKLFTMPDPDWTPEMAREAAQ >Mature_438_residues MDARTQPLALVEPIVTGNAKAAAAAAGATSADLWMVPYEQLHYDPRDNVRPVDQQWVSHLTALMIANGYDKSQPLHCYVR KVDGKDLIYVYKGQHRYLSAGNAIRAGKDLGKIPVVVRDAKTVERAEMVIDGYVSNESKRASPLDLATVVAELRDVHGLD TKTICKRLNVTDQTIRDVGLLEQAPAEIHQFVRDGSISGTLVIEQIRRHGAERTLERIVSSLSKAKDAGKTKVTKKHLHT ASPKSVAATAAAEPQRKIGEQHAKQLLQALQSVLHDPGFGKLSPGTIAGVHRALTGFEDLLDTVPTRRPKYPIAKANEHG VYEPSEILSAPISKRTGRASVEIRLAQIAEGDWEFGFSYAFNSAGGSSPCKRIDGESPGRYRTRVEAIRAAVQVLTRTLE STSASKAKEMAGVRRWLDKLFTMPDPDWTPEMAREAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47961; Mature: 47961
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARTQPLALVEPIVTGNAKAAAAAAGATSADLWMVPYEQLHYDPRDNVRPVDQQWVSHL CCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHH TALMIANGYDKSQPLHCYVRKVDGKDLIYVYKGQHRYLSAGNAIRAGKDLGKIPVVVRDA HHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCEEECCCCCHHCCCCCCCCCEEEECH KTVERAEMVIDGYVSNESKRASPLDLATVVAELRDVHGLDTKTICKRLNVTDQTIRDVGL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH LEQAPAEIHQFVRDGSISGTLVIEQIRRHGAERTLERIVSSLSKAKDAGKTKVTKKHLHT HHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC ASPKSVAATAAAEPQRKIGEQHAKQLLQALQSVLHDPGFGKLSPGTIAGVHRALTGFEDL CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LDTVPTRRPKYPIAKANEHGVYEPSEILSAPISKRTGRASVEIRLAQIAEGDWEFGFSYA HHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCEEEEEEEHHCCCCCCCCHHEE FNSAGGSSPCKRIDGESPGRYRTRVEAIRAAVQVLTRTLESTSASKAKEMAGVRRWLDKL ECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTMPDPDWTPEMAREAAQ HCCCCCCCCHHHHHHHCC >Mature Secondary Structure MDARTQPLALVEPIVTGNAKAAAAAAGATSADLWMVPYEQLHYDPRDNVRPVDQQWVSHL CCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHH TALMIANGYDKSQPLHCYVRKVDGKDLIYVYKGQHRYLSAGNAIRAGKDLGKIPVVVRDA HHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCEEECCCCCHHCCCCCCCCCEEEECH KTVERAEMVIDGYVSNESKRASPLDLATVVAELRDVHGLDTKTICKRLNVTDQTIRDVGL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH LEQAPAEIHQFVRDGSISGTLVIEQIRRHGAERTLERIVSSLSKAKDAGKTKVTKKHLHT HHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC ASPKSVAATAAAEPQRKIGEQHAKQLLQALQSVLHDPGFGKLSPGTIAGVHRALTGFEDL CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LDTVPTRRPKYPIAKANEHGVYEPSEILSAPISKRTGRASVEIRLAQIAEGDWEFGFSYA HHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCEEEEEEEHHCCCCCCCCHHEE FNSAGGSSPCKRIDGESPGRYRTRVEAIRAAVQVLTRTLESTSASKAKEMAGVRRWLDKL ECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTMPDPDWTPEMAREAAQ HCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA