| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812944
Identifier: 237812944
GI number: 237812944
Start: 2638362
End: 2638814
Strand: Reverse
Name: 237812944
Synonym: GBP346_A2704
Alternate gene names: NA
Gene position: 2638814-2638362 (Counterclockwise)
Preceding gene: 237812945
Following gene: 237812943
Centisome position: 64.38
GC content: 65.34
Gene sequence:
>453_bases GTGGCTCAGAAATTCGCGGCACATGATTCGAAGAATTTCATCACGGCATTTTACGACAGCGTAGACAGCCCCGCGCCGGC GGGCGTGACGTGCACCGAGATCACGGACGAGCAATGGAAGATGCTGCTCGACGGCGAGTCGCGGGGCAAGCGCATGGCGC TGGACGATAACGGCGTGCCGGTGCTGCTGGATCCGCCGCCGCCGACCATCGAACAGATCATCGTGAGCAATACGGCGATG CGTGATCGGCTGCTGGAGCGCGCGAGCGTCGCCCTGACGCCGCTACAGACGGCGATCATGCTGGGAGACGCAACCGACAG TGAGGCGCAGCAGGCCCGCGCATGGATCGCATACACGCGTGCGCTCAAGGGGATCGACCTGACGCGGCGCGAGCCGACAT GGCCCGAGCAACCCGAGATGGCACGCGAACGCAGCTCGTCGACGCGCCCCTAG
Upstream 100 bases:
>100_bases CAAGACCGGCGCGACCTTGAGCTGCCAGAACAACGCTGGCATGTCGGGTGGCGTAGGCGGCAATTATTTCGCGATTGGAT TTTGACTCAGGAGTGGGACA
Downstream 100 bases:
>100_bases TAACCGCCGCTTACTCGCAATCGAAGCCGCTTACCCAAGCGGCTTTTTCTTTTCTGGAGACCTGAATGGGTGCTACCTCA TTTTATCACGGAGTGACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MAQKFAAHDSKNFITAFYDSVDSPAPAGVTCTEITDEQWKMLLDGESRGKRMALDDNGVPVLLDPPPPTIEQIIVSNTAM RDRLLERASVALTPLQTAIMLGDATDSEAQQARAWIAYTRALKGIDLTRREPTWPEQPEMARERSSSTRP
Sequences:
>Translated_150_residues MAQKFAAHDSKNFITAFYDSVDSPAPAGVTCTEITDEQWKMLLDGESRGKRMALDDNGVPVLLDPPPPTIEQIIVSNTAM RDRLLERASVALTPLQTAIMLGDATDSEAQQARAWIAYTRALKGIDLTRREPTWPEQPEMARERSSSTRP >Mature_149_residues AQKFAAHDSKNFITAFYDSVDSPAPAGVTCTEITDEQWKMLLDGESRGKRMALDDNGVPVLLDPPPPTIEQIIVSNTAMR DRLLERASVALTPLQTAIMLGDATDSEAQQARAWIAYTRALKGIDLTRREPTWPEQPEMARERSSSTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16629; Mature: 16498
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKFAAHDSKNFITAFYDSVDSPAPAGVTCTEITDEQWKMLLDGESRGKRMALDDNGVP CCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCHHHHHEEECCCCCCCEEEECCCCCE VLLDPPPPTIEQIIVSNTAMRDRLLERASVALTPLQTAIMLGDATDSEAQQARAWIAYTR EEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH ALKGIDLTRREPTWPEQPEMARERSSSTRP HHCCCCCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure AQKFAAHDSKNFITAFYDSVDSPAPAGVTCTEITDEQWKMLLDGESRGKRMALDDNGVP CCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCHHHHHEEECCCCCCCEEEECCCCCE VLLDPPPPTIEQIIVSNTAMRDRLLERASVALTPLQTAIMLGDATDSEAQQARAWIAYTR EEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH ALKGIDLTRREPTWPEQPEMARERSSSTRP HHCCCCCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA