| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cysNC [H]
Identifier: 237812890
GI number: 237812890
Start: 2592004
End: 2593515
Strand: Reverse
Name: cysNC [H]
Synonym: GBP346_A2649
Alternate gene names: 237812890
Gene position: 2593515-2592004 (Counterclockwise)
Preceding gene: 237812892
Following gene: 237812889
Centisome position: 63.28
GC content: 72.49
Gene sequence:
>1512_bases ATGACGACGTCCATGAGAGAGCGTAGACGGGGTATTGCCTTTATGCGGTCCTGCGATGACTTTCTACGGACATCGGAATT GTCCATCGCGGCGGTCAACAGCCTGCGGCGCACCATCGCGCCGTCGCATCGGGTGCTGGACGCGTGCGGATCGGGCGCCG CCTGCCTGCTGGCGTCGCGCTACGGCGCGAAGCAGGTGGTGGCGCTCGCGGCCGCAGAGGCGACGCTCGTGGGGGCGCGA GCCGGCGCGAACGGTCCCGGCGAACGGATATCGTTCGTCGACGCCGAGCAGGCCGCGGCGCTCGTCGCGCGGCAAGGGCG GTTCGACGTCGTGCTCGGGCTCGCAGGCGGCGGGCGCGACGGGCTCGATCCGCATTACGGCGCTCGGCTCGACGCGTTCG CACGGCGCTTCGGCACGGCGAACGTTGCCGTCGTGCCCAACGGTGTGCGCTACGACGCGCAACTCGTCGAATGGCGCGAG GCCGAGCGGCTCGAGGCGGACGTCGCGGCCAGGCAGCGCGCCCTCGAAGCGCGCTACGACCTCACGCTTGGCCCGGTGCT CGACCAGGTGGCCGCCGGGGCCGCGCCGCGTGGCCGCGTGCGCGCCGACGCGCTGCGCGCGCTCTGCGCGCGGCTGCCGT TTCTGTCGTGCCGGCCGGGCGATGGCGGTGATGCCGGTACAAGCGGCACAAGCGGCACGGCGGCGCCCGAGCATGTCGAG TTGACCGCCGCGCACGGCGGCCGTGCCGACGGCGTGCTGTGGACGCAGGAGCTGATACACGACGGCATCGTCATCGAACG GATTCAGGGGTGCAGCTGGCTCGACGAACGCGTCGATCTCGAGGCGGGCGACGCGATCGCGGTGCCCGTCGCCGACATGG CGCGGGCCGCGCCGCTCGACGGCGGCGAAGCGCCGCCGCAGCTCGCGCCCACGCCGCGCGCATCCGGCGCGCCCGCGCCG CTCGTCTTCTGGCTGACCGGTATCTCGGGGGCCGGCAAGACGACGATCGCGACACGTTTCAAGCAGCGGGCGGACGCCGA CGCGTGGCCCACCGTCGTGCTCGACGGCGACACGCTGCGCGGCGGCCTCAACGCGGATCTCGGCTTCTGCGACGCGGACC GCGCGGAGAACGTGCGCCGCATCGCCGAGGTCGCGGCGCTGATGGCCGACACGGGGCTCGTCGTCGTCGTCTCGTGCATT TCGCCCAGGCGGTCGTTTCGCGAAACGGCGCGCGAAATCGTCGGCGCCGAGCGCTTCGTCGAGGTGTTCGTCGATACGCC GCCCGCGGTCGCGCAGGCGCGCGATCCGAAAGGGCTGTATCGGCGCGCACGCGCGGGGTTGATCGCGTCGTTCACCGGCA TCGATTCGGACTACGAGCCACCGCCGGATCCGCAATTGCGCATCGATACGACGACGCACGACGTCGAGGACGCGACGCAG ATGCTGCGCCGCTACTACGTCGACGCGCGCCTGTCCGGCGCGCGTGCGGGCACCGCCGAGTGCGCGGCGTGA
Upstream 100 bases:
>100_bases CGATTCATAAATCGGTTGCCTTTCCGTAGCGCCGCAGAAGATCAAATACGACATTCCGAGGGCGCGTGCCTGTATTGCAC GCGCATGTCAAAACGATTAA
Downstream 100 bases:
>100_bases CGCCGCCGCTCCGTTCCTTCCTTCGCCGATGGCCAATAGCGAGACAAACGATGAGCGTTCACGACATGACTCACCCGGGC GAGCTCGCACCGGTGCGAGC
Product: sulfate adenylate transferase, subunit 1/adenylylsulfate kinase
Products: NA
Alternate protein names: Sulfate adenylyltransferase subunit 1; ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT; Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase [H]
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MTTSMRERRRGIAFMRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEATLVGAR AGANGPGERISFVDAEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWRE AERLEADVAARQRALEARYDLTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVE LTAAHGGRADGVLWTQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPTPRASGAPAP LVFWLTGISGAGKTTIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCI SPRRSFRETAREIVGAERFVEVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQ MLRRYYVDARLSGARAGTAECAA
Sequences:
>Translated_503_residues MTTSMRERRRGIAFMRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEATLVGAR AGANGPGERISFVDAEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWRE AERLEADVAARQRALEARYDLTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVE LTAAHGGRADGVLWTQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPTPRASGAPAP LVFWLTGISGAGKTTIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCI SPRRSFRETAREIVGAERFVEVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQ MLRRYYVDARLSGARAGTAECAA >Mature_502_residues TTSMRERRRGIAFMRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEATLVGARA GANGPGERISFVDAEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWREA ERLEADVAARQRALEARYDLTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVEL TAAHGGRADGVLWTQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPTPRASGAPAPL VFWLTGISGAGKTTIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCIS PRRSFRETAREIVGAERFVEVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQM LRRYYVDARLSGARAGTAECAA
Specific function: APS kinase catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=161, Percent_Identity=53.416149068323, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI34447231, Length=161, Percent_Identity=51.5527950310559, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI62912492, Length=161, Percent_Identity=51.5527950310559, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI1789107, Length=167, Percent_Identity=49.7005988023952, Blast_Score=171, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17542422, Length=160, Percent_Identity=46.25, Blast_Score=143, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322852, Length=171, Percent_Identity=44.4444444444444, Blast_Score=155, Evalue=1e-38, Organism=Drosophila melanogaster, GI24667032, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24667028, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24667036, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24667040, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI116007838, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24667044, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF01583 APS_kinase; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4; =2.7.1.25 [H]
Molecular weight: Translated: 53142; Mature: 53011
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSMRERRRGIAFMRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASR CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHH YGAKQVVALAAAEATLVGARAGANGPGERISFVDAEQAAALVARQGRFDVVLGLAGGGRD CCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCEEEEEEECCCCCC GLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWREAERLEADVAARQRALEARYD CCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVE CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LTAAHGGRADGVLWTQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLD EEECCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCEEEECHHHHHHHCCCC GGEAPPQLAPTPRASGAPAPLVFWLTGISGAGKTTIATRFKQRADADAWPTVVLDGDTLR CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCC GGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCISPRRSFRETAREIVGAERFV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHH EVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQ HHHCCCCCHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHH MLRRYYVDARLSGARAGTAECAA HHHHHHHHHHCCCCCCCCHHCCC >Mature Secondary Structure TTSMRERRRGIAFMRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASR CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHH YGAKQVVALAAAEATLVGARAGANGPGERISFVDAEQAAALVARQGRFDVVLGLAGGGRD CCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCEEEEEEECCCCCC GLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWREAERLEADVAARQRALEARYD CCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVE CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LTAAHGGRADGVLWTQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLD EEECCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCEEEECHHHHHHHCCCC GGEAPPQLAPTPRASGAPAPLVFWLTGISGAGKTTIATRFKQRADADAWPTVVLDGDTLR CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCC GGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCISPRRSFRETAREIVGAERFV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHH EVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQ HHHCCCCCHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHH MLRRYYVDARLSGARAGTAECAA HHHHHHHHHHCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]