| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812886
Identifier: 237812886
GI number: 237812886
Start: 2587096
End: 2588496
Strand: Reverse
Name: 237812886
Synonym: GBP346_A2645
Alternate gene names: NA
Gene position: 2588496-2587096 (Counterclockwise)
Preceding gene: 237812887
Following gene: 237812885
Centisome position: 63.16
GC content: 72.23
Gene sequence:
>1401_bases ATGAGCACGACGACGGTTGCGATTATCGGTGCGGGGTTTTGCGGGGCGACGCTGGCGACGCATCTGCTGCGAAGGCCGCC GGTGCGGCCGATGCGGGTGCTGCTGATCAACCGGTCGGGCGCGATGGCGCGCGGCGTGGCGTACGGCACGCGCGCGCTCG GCCATCTGCTGAACGTGCCCGCCGGCCGGATGAGCGCGGTGGCCGGCGACGATGACGACTTCTATCGATACGCGAGCGGG CGCGATCCGCGCGTCGCGCGCGGCAGCTTCGTGCCGCGGCGGATCTACGGCGACTACCTCGAGGCGCGCCTGACCGAGGC GATCGAGCAGGCGCACGCGGGCATCGAATTTTGTAGCGTGGTGGGCAGCGCGGTGAGAATCGCGCCCGTCGACGGCGGCG CGCGCGGCGCGATCACGATGGACGGCGGCGCGGTGATCGAGGCCGACCGCGTCGTGCTGAGCAGCGGCAACGAAATGCGC CGCGATCCGTTCATCGCCGAATCGCAACGCAAGTTCTACGACAGCCATGCCTACGTTCGCGATCCATGGCGGCCGGGCGC GCTGCGCGGCATCGCGCCCGATACGCCGGTGCTGCTCGTGGGCAGCGGGCTCACGATGATGGACGTGGTGCTCGATTTGC GCGCCCGGGGCCACGCGGCGCCGATTCACGTGGTGTCGCGCCACGGGTTGATGCCGCTCGCGCACCGTGAGATGGACGCG CCGCCGTCCTACGACGATCGGCTGGCGGCCCGCATGCTCGCGCGCGCGGACGTGCGCCATTACGTGCGCGTGGTGCGCGA CGCGATTCGCCGAGGCGGCGACTGGCGAGACGTGATCGGTTCGCTGCGCGCGGCGACGCCGGCGCTGTGGCGCCAGTTGC CGAGCGACGAGCGCCGGCGCTTCCTGCGCCATGTCAGGCCGTACTGGGACGTGCATCGCCACCGCTGCGCGCCCGAGCCG GCCGCACGGCTGCAAGCGGAATTCGAGCGAGGCGGCGTCGCGGCCGTCGCGGGGCGGGTGACGGGCTACAGCGAGCATCC GAACGGCGTCGGCGTGACGGTGCGCCGGCGCGGCGCGGCCGTCGACGAGCGTCTCGAGGTGGGCGCGGTCGTCAACTGCA CGGGGCCGGCACCGGACTTCAGCGCGCGGGCGGGATCGCTGCTCGGCAACCTGTATGCGGACGGGCTGATCGTGCCGGAT GCGATCGGCATGGGGTTCGAGATCGCCGACGACGGCGCGGTGCTCGATCGCGACGGCTCGCCGTCGGCGTGGCTGCGTTA TGTCGGACCGTTGCTGCAGGCGCGCGATTGGGAGGCGACGGCGGTGCCGGAACTGCGGCAGTACGTGCAGCGGCTCGCCG ATACGCTGCTCGCGCCGCGTGACGAACGGGCGCTGACCTAG
Upstream 100 bases:
>100_bases AGGTGGCGACGCGGCGGCGCGCGCGATCCGGAGGGGGCGACGAGCGAATGGACGTCGGGGAAGCGGGGCGTGCGGCACCA TCCAAACGAACGGGGAAGCA
Downstream 100 bases:
>100_bases TGGCGCGGAGCGGCGCGCATCCGCTTGCGGACGGTGGGCGGGCCGTCGTGCTTCAGGACGGGACGCATAAAATAGGATTG CATATGAAACAATCATATGA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Hydroxyacylglutathione Hydrolase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Beta-Lactamase Domain-Containing Protein; FAD-Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSTTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVPAGRMSAVAGDDDDFYRYASG RDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFCSVVGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMR RDPFIAESQRKFYDSHAYVRDPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA PPSYDDRLAARMLARADVRHYVRVVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRRFLRHVRPYWDVHRHRCAPEP AARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAAVDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPD AIGMGFEIADDGAVLDRDGSPSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT
Sequences:
>Translated_466_residues MSTTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVPAGRMSAVAGDDDDFYRYASG RDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFCSVVGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMR RDPFIAESQRKFYDSHAYVRDPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA PPSYDDRLAARMLARADVRHYVRVVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRRFLRHVRPYWDVHRHRCAPEP AARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAAVDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPD AIGMGFEIADDGAVLDRDGSPSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT >Mature_465_residues STTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVPAGRMSAVAGDDDDFYRYASGR DPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFCSVVGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMRR DPFIAESQRKFYDSHAYVRDPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDAP PSYDDRLAARMLARADVRHYVRVVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRRFLRHVRPYWDVHRHRCAPEPA ARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAAVDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPDA IGMGFEIADDGAVLDRDGSPSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT
Specific function: Unknown
COG id: COG4529
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50730; Mature: 50598
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVP CCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC AGRMSAVAGDDDDFYRYASGRDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFCSV CCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMRRDPFIAESQRKFYDSHAYVR HCCCEEEEECCCCCCEEEEECCCEEEEECEEEECCCCHHHCCCCCHHHHHHHHHCCCEEE DPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCC PPSYDDRLAARMLARADVRHYVRVVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHH FLRHVRPYWDVHRHRCAPEPAARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAA HHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCEEEEECCCCC VDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPDAIGMGFEIADDGAVLDRDGS HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEECCCCC PSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure STTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVP CCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC AGRMSAVAGDDDDFYRYASGRDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFCSV CCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMRRDPFIAESQRKFYDSHAYVR HCCCEEEEECCCCCCEEEEECCCEEEEECEEEECCCCHHHCCCCCHHHHHHHHHCCCEEE DPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCC PPSYDDRLAARMLARADVRHYVRVVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHH FLRHVRPYWDVHRHRCAPEPAARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAA HHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCEEEEECCCCC VDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPDAIGMGFEIADDGAVLDRDGS HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEECCCCC PSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA